Gene Psyr_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1111 
Symbol 
ID3366605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1258918 
End bp1259655 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID637651452 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_234203 
Protein GI66044362 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.53214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCCAG TCAGTAAATC GATCCTGTTG GTGGATGACG ATCAGGAAAT TCGCGAGTTG 
CTGGACACCT ACCTGAGCCG CGCCGGTTTC CAGGTGCGCA CGGTGGGTGA TGGCGCGGAT
TTCCGCCGGG CGTTCAATGA CCAGCCAAGC GACCTGCTGA TCCTTGACGT CATGCTGCCC
GATGAAGACG GTTTCAGTCT GTGTCGCTGG ATCCGCCAGC ATCCGCGCCA GCCGCATGTG
CCGATCATCA TGTTGACTGC CAGTTCTGAC GAGGCCGACC GGGTCATCGG CCTGGAGCTG
GGAGCCGATG ATTATCTGGG CAAGCCGTTC AGTCCGCGCG AGCTTCAGGC GCGCATCAAG
GCGCTGTTGC GACGTGCCCA GTTCGGTCAG GAGCGTCCGG GTGGCGATGT GATCCTGTTT
GATGAGTGGC GACTGGACAT GGTCAGCCAC CGGCTGTTTC ACAATGACGG CGAAGAGGTG
ATTCTGTCCG GCGCCGACTT CGCACTGCTC AAACTGTTTC TCGACAACCC CCAGCAGATT
CTCGACCGCG ACACCATCGG CAACGCCACG CGTGGGCGAG AGCTGATGCC GCTGGAGCGG
ATCGTCGACA TGGCGGTCAG CCGCCTGCGT CAGCGTCTGC GCGACACCGG CAAGTCGCCG
CGTCTGATCC GTACCATTCG TGGCAGTGGT TACCTGCTGG CCGCAAACGT CAACTCGCAA
GCGGGCAACG GCTATTAA
 
Protein sequence
MSPVSKSILL VDDDQEIREL LDTYLSRAGF QVRTVGDGAD FRRAFNDQPS DLLILDVMLP 
DEDGFSLCRW IRQHPRQPHV PIIMLTASSD EADRVIGLEL GADDYLGKPF SPRELQARIK
ALLRRAQFGQ ERPGGDVILF DEWRLDMVSH RLFHNDGEEV ILSGADFALL KLFLDNPQQI
LDRDTIGNAT RGRELMPLER IVDMAVSRLR QRLRDTGKSP RLIRTIRGSG YLLAANVNSQ
AGNGY