Gene Rpic_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3671 
Symbol 
ID6286746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3844011 
End bp3844721 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID642627255 
Producttwo component transcriptional regulator, Fis family 
Protein accessionYP_001901221 
Protein GI187930734 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TCCTCGTTGT CGACGACGAA ATGGGTATCC GGGAGTTGCT CTCCGAAATC 
CTCGGAGACG AAGGGCACGT TGTTGAAGTC GCCGAGAACG CGCAGCGCGC GCGCGAATAC
CGCGCGAACG CAACGCCCGA CCTCGTCCTG CTCGATATCT GGATGCCGGA TACCGACGGC
GTGACGCTGC TCAAGGAATG GGCATCGCAA GGTCTGCTGA CCATGCCCGT CATCATGATG
TCGGGCCACG CCACCATCGA CACTGCTGTC GAGGCGACCA AGATCGGCGC GCTGAATTTC
CTGGAGAAGC CCATCGCGCT GCAGAAACTG CTGACCGCGG TGGAGCAGGG GCTGTCGCGC
AGCAAGGAAA AGCCGCGCTC GGCCACACCG GCTGCCGCTC CGGTGGCGGG ACTCGCAGGC
GCCATGCCAA ACGCCGCCGC AGGTACACCC GCCGCGCTCG AGCGCACCGA CATCAATGGC
GTACCGACCC GTGCAGCCGA AAGCGGCGGC ATGCAGTTCT CGTTCGACAT GCCGCTGCGC
GAGGCGCGCG ACCTGTTTGA GCGCGCGTAC TTCGAATATC ACCTGCAGCG TGAAGGCGGC
AGCATGACGC GCGTAGCAGA AAAGACCGGT CTGGAGCGGA CTCACCTGTA CCGAAAGCTC
AAGCAACTGG GCGTCGAACT CTCGCGTAAC AAGGGCGAAC CGGCGACCTG A
 
Protein sequence
MATILVVDDE MGIRELLSEI LGDEGHVVEV AENAQRAREY RANATPDLVL LDIWMPDTDG 
VTLLKEWASQ GLLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LTAVEQGLSR
SKEKPRSATP AAAPVAGLAG AMPNAAAGTP AALERTDING VPTRAAESGG MQFSFDMPLR
EARDLFERAY FEYHLQREGG SMTRVAEKTG LERTHLYRKL KQLGVELSRN KGEPAT