| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2852 |
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| Symbol | |
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| ID | 8359013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3518849 |
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| End bp | 3522877 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965032 |
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| Product | histidine kinase |
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| Protein accession | YP_003122532 |
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| Protein GI | 256421879 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0012841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAT ATGAGTCGAT GAAGCAGCTT CTTTTTTATT GCCTGATTTT TTTGTGTTAC
CAGACCAGCG GACAGCAGAT ACGTTTTCGG AATTATTCCG TGGCGGAAGG ACTGCCTTCC
AGCACTGTGC GTACGATTGC ACAGGATGAC CAGGGTTATC TCTGGTTTGG TACCAAAAAC
GGTATCAGTC GTTTTGATGG ATACCAGTTC AGAAACTTTC AGTACAAAAA GAACGACGCT
ACTTCCCTCG GCAACAACTT TTTACATTGC ATCACCCGTA TCGATAGTAC ACATCTCTGG
ATAGGTACTG AAAGCGGGAT ATACATACTT GATCTGGAAA AAGAACAGTT TTCTCATTTC
GGTCCGCCAA AGGAGAAAAC TGTTTTTGAT ATCCTCCGGG ATAAGGAGGG TATCATCTGG
TTTACTTCAC GGCTGAATGG TTTATACAGC TATGATCCGC AGAAAAAATC TCTCCATAAC
TTTAAGGCAG GCAATTCCCG CTTGTCCAGC GATAATGTGA CCCGGATCGC ACAGGATGAC
GACGGAAATA TCTGGATCGG TACGTACGGA GATGGGATTG ATATCTATAA TCCTGTTACC
GGTACATTTA CCAATCTGCA TGCAGGTACC AGCGGATTAA GTAATGATGT GATCAATGCT
ATCTATAAAG GCGAGGATGG TATCATGTGG GTAGGCACCA TGAATGGCGG TTTGTGCAAA
TGGGATCCCG TGGCGCGTAA CTTTCAGGTG TACCGCAATA ATGGCCATCC TTATGACATC
AATGATAATA TTATACGGGC GATATGCCAG GTGTCCCCGG ATAAGTTATA TGTGGGGACA
GAGAAGGGAT TGAATGTACT GGATATTGCG ACAAACAGAT TTACAGCCTA CATCAACAAA
GGAAATGACC CGTTCAGTAT CAGCGACAAT GCCATTTACT CCTTATTCCC TGACAGGGCT
GGTACGATGT GGATAGGAAC GTTCTTCGGA GGCGCCAGTT ATTTTAATGA GAAAGGACCT
GTCTTTGAAT TGTATTATCC TACAGGAGAA CAAAATGGAC TGTCAGGCCG TGCAGTCAGC
TCCTTCCTGG AAGATGGTCC CGGAAAGTTG TGGATCGGTA CAGAAGACGG CGGCTTACAA
TACTTTAATA CAATCACCCA TACCTTCCAG CAATATCCGT TTCTGCCCAC ACAGCAGAAA
CTCTCTTATC ACAATATTCA CACCTTATTG AGAGATAACG CAGGTAATAT CTGGATAGGA
TTGTTTGCGG CCGGTATCAA CGTACTGGAC CCGAGGACGG GTAAGGTAAC CTGTTTGCAG
CACCATACGG AAGATATTCA TTCCCTGAAC AGCAACAATG TTTTCTGTAT TTACCAGGAC
AGGGACGGTG GTATGTGGAT CGGGACAGAC AAAGGACTGG ACCAGTATGA TAGTGGCCGG
CGTGATTTTA CACGGGTACT CCGCGAAGGC GTTAGTAACA CCATCATCTA TGATATTTAT
GAAGACGATA ATAAGACCCT TTGGTTTGCT ACCTACAACA ATGGCCTGAT ATTCTATAAT
AAGAAAACCG ACCAATGGGA CAGAGTTGTA GCAGATGGGA TGGTCAAGCT GACCAGTCTG
TATGATGATC ACCAGGGGCA TCTCTGGATA GGATCAGACG GTGGCGGATT GCATAAGTAT
GACTTCCGTA CCAGGAAGGT AGAAGCTTAC AATGACAAAG CGGGTATCAA TGCTAATGTG
GTATATGGTA TCCGGCAGGA TGATGCAGGA CTGATCTGGA TAACGACAAA TAATGGCATT
TATAGTATAG ATCCTGCAAC ACACAAAGCA AGGCATTTTA CACCACAGGA CAACCTTCAA
AGCCGTCAGT TCGACTACAA GGCATTTTAT AAAATGTCAG ACGGTAAATT GTTTGCCGGC
GGTATCAAAG GGTTTAATGC TTTTTATCCG GAGAAAGTTT CCACGGTGAC AGACAAGATC
CGTGTCTCTT TTACCAACTT TCAGTTGTTC AACAGAAATG TACCGATACA GGAGGATGGC
CCCTTGTCTA AACAGATCAA TTATGCCAGT AAACTGGTTT TACAACATGA CCAATCTGTG
ATCAGTTTTG AATTCGCTGC CCTTAATTTC AGTGCACCAG AGAAGTTGAG TTATGCTTAT
AAGATGGATG GTTTTGACAC AGACTGGAAC TATGTGGGCG ACCAGCGCAA GGCTACTTAT
ACCAATCTGT CGCCCGGTAC TTACACGTTC CGGGTAAAGG CTACAGAAGA GAAGAGTAAC
TGGGATGTGA CCGAATCCAC CATGAAGGTG ATTATAAAGC CGCCTTTCTA TAGAACGACA
GTGGCGTATA TCATTTTTGT ATTGCTGGCA TTAGGCGCTG CCTATGGTGT TTATCTGTAT
TCTTCTGCTT ATATCCGGAG GAAACACCAG ATTCGGATAG AACGACTGAA AAACAAGGAA
GAGCAGGAGT TTTACGCCAG GAAGATTGAA TTCTTTACAG TCATGGCGCA CGAAATAAGG
ACACCCTTAT CACTGATCAT TGCACCATTA GAGAAACTGT TGTCCATGAA TAAGTGGCAG
CAGGAGGAAA AACAACAGCT GGTTGTAATG GACGAAAATG CAGAAAGATT GATGGACCTG
GTGAACCAGT TGCTTGATTT CAGAAGAATC GAAAGCGATG CGTATGAGAT CCGGAAGGAA
GAAGTAGAAG TGGTATCGTT GGTGCAATCT ATTTATTCCA GGTTTTCCGC ACTGCCTTAT
CAGAAAGATA TTGAATTTAC TTTGAGCATA CGGGTGAGCA GTTTATCATT GCCAGCAGAT
CCCGAAGTGC TGAATAAGAT ACTGAGCAAT CTCCTGATCA ATGCATTCCG GTATGCAAAG
AAAAAAGTCA GCATCTCTGT TTATGAGATG ACCAGTGTAG AAAGTGATGT GGCAAGACTT
TGTATCAGTG TGGAAGATGA TGGAATTGGC ATACCCTCAG ACGACCTGAA AAACATCTTT
AAACAGTTCT TTACCACGGT CAGGAAAGGA CAGGAGGATC GTCACCCGGG AGGTACCGGT
ATTGGTCTGG CACTGGCCAG TTCCCTGGCA GATAAACATG GCGGGAAGCT GTTGGTGGAA
AGCAGGGAAG GGGAACAGAC CATTTTTACC CTGGAACTAC CGGTTACAAA AGAACAAGCC
CCTAAACAGG CACATAGCCA GGAGGACGAT ATCCTTGATG AGGAAAGACC GTTGATCTTA
GTGGTAGAGG ATGATATGGC GATACAGACG TTCCTGGCTG CTAGTTTCCG CGATACCGGC
TATAGTGTAT TGAAGGCAGC CAACGGGAAG GCGGCTATGG CCTTGATTGA GGCCCATGCC
ATCGACCTGG TGATCTCTGA TATTATGATG GCAGAGATGG ACGGGATTGA ATTGTGTCAG
CAGGTCAAAA CCAATATCGA GTATAGTCAC ATTCCTTTTA TGCTGCTTTC TGCCAGGGGA
AATAGTGAAT CAGAGCTGAA AGGCATTGAA GCAGGCGCGG ATGCTTATAT CATGAAGCCC
TTTAAATTCA AACATATTGT GGCGGTGGCG AAAAACCTGA TGGCATCCAG GGAAAGTCTC
CGGCTGAAAT TTTCAGAACA GCCGAACAGT GACGTAAGCG TGTTAGCTAC CAATAGCCGC
GATAAAGCAT TTATGGAAAA GGTAGTGAGC ATTATTGAAG AACGTATCAT AGATCCGCAG
CTTTCAGTAG AGGAGCTGAG CCGGAATATG GCCATGAGCA GGTCCAATCT GCATAAAAAG
CTGAAATCCC TGTCGGGATA TGTGCCTAAC GAACTGATAA AGCTCGTAAG ACTGAAACAT
GCGGCAAAAC TCCTGGTAAA CGGTGAACAT ACGGTAACGG AAGTCGCTTA TATGACGGGC
TTTAGTTCTC CATCCTATTT CTCAAAATGT TTCCTGCAGC AGTTCAAGGT GACGCCAAAA
GAATATGCCG ATAATAAGCC TAAACCGGGT ACATCGCATT TGGATGATTT GTTGAAGGGT
GGGCAATGA
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| Protein sequence | MDRYESMKQL LFYCLIFLCY QTSGQQIRFR NYSVAEGLPS STVRTIAQDD QGYLWFGTKN
GISRFDGYQF RNFQYKKNDA TSLGNNFLHC ITRIDSTHLW IGTESGIYIL DLEKEQFSHF
GPPKEKTVFD ILRDKEGIIW FTSRLNGLYS YDPQKKSLHN FKAGNSRLSS DNVTRIAQDD
DGNIWIGTYG DGIDIYNPVT GTFTNLHAGT SGLSNDVINA IYKGEDGIMW VGTMNGGLCK
WDPVARNFQV YRNNGHPYDI NDNIIRAICQ VSPDKLYVGT EKGLNVLDIA TNRFTAYINK
GNDPFSISDN AIYSLFPDRA GTMWIGTFFG GASYFNEKGP VFELYYPTGE QNGLSGRAVS
SFLEDGPGKL WIGTEDGGLQ YFNTITHTFQ QYPFLPTQQK LSYHNIHTLL RDNAGNIWIG
LFAAGINVLD PRTGKVTCLQ HHTEDIHSLN SNNVFCIYQD RDGGMWIGTD KGLDQYDSGR
RDFTRVLREG VSNTIIYDIY EDDNKTLWFA TYNNGLIFYN KKTDQWDRVV ADGMVKLTSL
YDDHQGHLWI GSDGGGLHKY DFRTRKVEAY NDKAGINANV VYGIRQDDAG LIWITTNNGI
YSIDPATHKA RHFTPQDNLQ SRQFDYKAFY KMSDGKLFAG GIKGFNAFYP EKVSTVTDKI
RVSFTNFQLF NRNVPIQEDG PLSKQINYAS KLVLQHDQSV ISFEFAALNF SAPEKLSYAY
KMDGFDTDWN YVGDQRKATY TNLSPGTYTF RVKATEEKSN WDVTESTMKV IIKPPFYRTT
VAYIIFVLLA LGAAYGVYLY SSAYIRRKHQ IRIERLKNKE EQEFYARKIE FFTVMAHEIR
TPLSLIIAPL EKLLSMNKWQ QEEKQQLVVM DENAERLMDL VNQLLDFRRI ESDAYEIRKE
EVEVVSLVQS IYSRFSALPY QKDIEFTLSI RVSSLSLPAD PEVLNKILSN LLINAFRYAK
KKVSISVYEM TSVESDVARL CISVEDDGIG IPSDDLKNIF KQFFTTVRKG QEDRHPGGTG
IGLALASSLA DKHGGKLLVE SREGEQTIFT LELPVTKEQA PKQAHSQEDD ILDEERPLIL
VVEDDMAIQT FLAASFRDTG YSVLKAANGK AAMALIEAHA IDLVISDIMM AEMDGIELCQ
QVKTNIEYSH IPFMLLSARG NSESELKGIE AGADAYIMKP FKFKHIVAVA KNLMASRESL
RLKFSEQPNS DVSVLATNSR DKAFMEKVVS IIEERIIDPQ LSVEELSRNM AMSRSNLHKK
LKSLSGYVPN ELIKLVRLKH AAKLLVNGEH TVTEVAYMTG FSSPSYFSKC FLQQFKVTPK
EYADNKPKPG TSHLDDLLKG GQ
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