| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0078 |
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| Symbol | |
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| ID | 1218880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 89947 |
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| End bp | 90666 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236434 |
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| Product | two component response regulator transcription regulator protein |
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| Protein accession | NP_518199 |
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| Protein GI | 17544797 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000511995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA TCCTCGTTGT CGACGACGAA ATGGGTATCC GGGAGTTGCT CTCCGAAATT
CTCGGAGACG AAGGACACGT TGTCGAAGTC GCCGAGAACG CGCAGCAGGC GCGCGAACAC
CGCAACGGCG CCACGCCTGA CCTGGTGCTG CTCGATATCT GGATGCCGGA CACCGACGGC
GTGACGCTGC TCAAGGAGTG GGCCTCGCAG GGGCTGCTGA CGATGCCGGT CATCATGATG
TCCGGCCACG CCACCATCGA CACGGCGGTG GAAGCCACCA AGATCGGTGC GCTCAACTTC
CTGGAAAAAC CGATCGCCTT GCAGAAGCTG CTGGCTGCAG TGGAGCAGGG CCTGGCGCGC
GGCAAGGAAA GGCCGCGCGT CTCGCCGGCG GCACCGCTGG CGGTCGCGGC CGTCGGTGGG
GGCAGCGCAC CGCTTGCGGC TGCTGCGCAG GGGGCGGTCC TGGCGACGGA TCGCGCCGAC
GTGAACGGTG CGCCGGTGCG CGCGGCCGAG GGCGGCGGCA TGCAGTTCTC GTTCGACATG
CCGCTGCGCG AGGCGCGCGA TCTGTTCGAG CGCGCCTACT TCGAATACCA CTTGCAGCGC
GAAGGCGGCA GCATGACCCG CGTGGCGGAG AAGACCGGAC TGGAGCGTAC CCACCTGTAC
CGCAAGCTCA AGCAACTGGG CGTGGAGCTG TCGCGCAACA AGGGTGAACC GTCGGCCTGA
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| Protein sequence | MATILVVDDE MGIRELLSEI LGDEGHVVEV AENAQQAREH RNGATPDLVL LDIWMPDTDG
VTLLKEWASQ GLLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LAAVEQGLAR
GKERPRVSPA APLAVAAVGG GSAPLAAAAQ GAVLATDRAD VNGAPVRAAE GGGMQFSFDM
PLREARDLFE RAYFEYHLQR EGGSMTRVAE KTGLERTHLY RKLKQLGVEL SRNKGEPSA
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