Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2269 |
Symbol | |
ID | 4690938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2575893 |
End bp | 2576567 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639850036 |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_997035 |
Protein GI | 121609228 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.606138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.860572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAATA TTCTGGTGGT CGACGATGAG CTCGGCATAC GTGACCTGTT GTCGGAAATC CTGAACGACG AAGGTCACAG CGTAGACCTC GCAGAAAACG CAACCCAGGC CCGCGCCGCC CGGGCAGGCA CCAGGTATGA CTTGGTGCTG CTGGACATCT GGATGCCTGA CACCGATGGC GTCTCGCTGC TCAAGGAATG GGCCACGGCC GGCCTGCTGA CCATGCCCGT GATCATGATG AGCGGTCACG CCACCATCGA CACCGCCGTG GAGGCTACGC GCATTGGCGC TTTCTCGTTC CTTGAAAAGC CGATCACCCT GCAAAAGCTG CTCAAGGCCG TCGAGCAGGG CTTGGCGCGC AATGTCGCCC ACCCGGTGGC CGCAGTCCAG CCGCCCGCAG CGGAGCCGGC AACAAATCCG GGCTACGCGC CGCTGCCCGC CATGTCGGCC GTGCTCACGG GCGCCGATGC CGGCCCCCAT TCACACCAGG ACTTTGACCT GAACCGTCCG CTGCGTGAGG CCCGCGACGA TTTCGAGAAA GCCTATTTCG AGTTTCACCT CAAGCGCGAA GGGGGCTCCA TGACCCGCGT CGCCGAGAAG ACCGGCCTGG AGCGCACCCA CCTGTACCGC AAGCTGCGCC AGCTCGGGGT CGATCTCGGA CGCAAGCGGG GTTAG
|
Protein sequence | MANILVVDDE LGIRDLLSEI LNDEGHSVDL AENATQARAA RAGTRYDLVL LDIWMPDTDG VSLLKEWATA GLLTMPVIMM SGHATIDTAV EATRIGAFSF LEKPITLQKL LKAVEQGLAR NVAHPVAAVQ PPAAEPATNP GYAPLPAMSA VLTGADAGPH SHQDFDLNRP LREARDDFEK AYFEFHLKRE GGSMTRVAEK TGLERTHLYR KLRQLGVDLG RKRG
|
| |