| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1980 |
|---|
| Symbol | ompR |
|---|
| ID | 3570229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2129688 |
|---|
| End bp | 2130419 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637680451 |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_285196 |
|---|
| Protein GI | 71907609 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.431202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.459947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AACACCAACA CCACCATATT CTTGTCGTCG ATGACGATGC CCGGCTGCGC
GACCTGCTGG TTCGCTACCT GGGCGAACAG GGCTTCGAGG TCAAGGCCGC TGCCGATGGC
CAGCAGATGG ACAAGCTGCG CAGCCGCGAA CACTACCACC TGATCGTGCT CGACCTGATG
ATGCCGGGCG AAGATGGCCT GACCATCTGC CGCCGCCTGC GCGGCCAGGG CGACCAGACA
CCGATCATCA TGCTGACGGC CAAGGGCGAT GAAGTGGATC GTATCGTTGG CCTCGAAATG
GGTGCCGACG ATTACCTGCC CAAGCCCTTC AACCCGCGTG AACTGCTCGC CCGCATCCAC
GCCGTGTTGC GCCGCCAGGG CAGCAAACCG CCAGGTGCTC CGGAAGATGA GCCGGAAACG
ATCACCTTCA GCAACATCGA AGTCGATCTC GCAGCCCGCA CGCTGAAGCG TGGCGAAGAA
CTGCAAGCGC TGACCACCGG TGAATTTGCC GTGCTGAAAG TGCTGCTCCA GCACCCGCGC
CAGCCGCTTT CCCGCGACAA GCTGATGTCG CTGGCCCGCG GCCGGGAACA AGGGCCATTC
GACCGCGCCA TCGACGTCCA GGTATCCCGC CTGCGCAAGC TGATCGAAAC TGATCCGGCC
CAACCGCGCT ACCTGCAGAC CGTCTGGGGC TTCGGCTACG TCTTCGTGCC GGACGGCGCC
TCCCGGGACT GA
|
|---|
| Protein sequence | MSEQHQHHHI LVVDDDARLR DLLVRYLGEQ GFEVKAAADG QQMDKLRSRE HYHLIVLDLM
MPGEDGLTIC RRLRGQGDQT PIIMLTAKGD EVDRIVGLEM GADDYLPKPF NPRELLARIH
AVLRRQGSKP PGAPEDEPET ITFSNIEVDL AARTLKRGEE LQALTTGEFA VLKVLLQHPR
QPLSRDKLMS LARGREQGPF DRAIDVQVSR LRKLIETDPA QPRYLQTVWG FGYVFVPDGA
SRD
|
|---|
| |