Gene PputGB1_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0297 
Symbol 
ID5867994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp347600 
End bp348322 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID641545377 
Producttwo component transcriptional regulator 
Protein accessionYP_001666546 
Protein GI167031315 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CCTTGCTGGT TGTCGATGAT GACGACGAGA TCCGCGAACT TCTTTGCGAT 
TACCTGAAAG ATGCCGGCTA TAACGTGTTA GCTGCGGCCG ACGGTGAACA GATGCGCGAG
CAGCTGGCCC GGCAAAAAGT GGAGCTGGTG GTGCTCGACT TGATGCTGCC TGGCGAGGAC
GGTCTGAGCC TGTGCCGTCA GCTGCAGGCC ACACCTGGGC TGGCGGTGAT CATGCTGTCG
GCCAAAGGCA GCACGCTGGA CCGCATCATC GGCCTGGAGG TGGGTGCCGA CGACTACCTG
GCCAAGCCCT TCGAGCCACG CGAGCTGATC GCCCGGATCA AGGCCGTGCT GCGTCGCCCG
CAACGCCTGG ACGCACAGGC CGAAGAGCCC GCCGTGATGG ATGCGCAGCT GTTCGCCGGG
TTTCGCCTGG AACACGTAAA GCGCCTGCTG ACTCGGCCCG ATGGCGAGAC CCTGACCCTG
CCGCGCTCCG ACTACCGCGT ACTGCGTGAA CTGCTGGAAG CCAACAACCG CGTGGTCTCC
CGCGACCAGC TGACGCGCAG TGCGTTCGGC CGCGACCACC TGCCCGACGA CCGCTCGGTT
GACATGTGCG TCAGCCGCCT GCGTCAGCAA CTGCGCCGTG CACCGGCGGG GGCCGCGCAA
ATCCTAACCA TCCGCAACGA AGGCTACCTG CTGAGCATCG CCAGCCACGA GGCCGATGCC
TGA
 
Protein sequence
MSTTLLVVDD DDEIRELLCD YLKDAGYNVL AAADGEQMRE QLARQKVELV VLDLMLPGED 
GLSLCRQLQA TPGLAVIMLS AKGSTLDRII GLEVGADDYL AKPFEPRELI ARIKAVLRRP
QRLDAQAEEP AVMDAQLFAG FRLEHVKRLL TRPDGETLTL PRSDYRVLRE LLEANNRVVS
RDQLTRSAFG RDHLPDDRSV DMCVSRLRQQ LRRAPAGAAQ ILTIRNEGYL LSIASHEADA