Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0297 |
Symbol | |
ID | 5867994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 347600 |
End bp | 348322 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545377 |
Product | two component transcriptional regulator |
Protein accession | YP_001666546 |
Protein GI | 167031315 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CCTTGCTGGT TGTCGATGAT GACGACGAGA TCCGCGAACT TCTTTGCGAT TACCTGAAAG ATGCCGGCTA TAACGTGTTA GCTGCGGCCG ACGGTGAACA GATGCGCGAG CAGCTGGCCC GGCAAAAAGT GGAGCTGGTG GTGCTCGACT TGATGCTGCC TGGCGAGGAC GGTCTGAGCC TGTGCCGTCA GCTGCAGGCC ACACCTGGGC TGGCGGTGAT CATGCTGTCG GCCAAAGGCA GCACGCTGGA CCGCATCATC GGCCTGGAGG TGGGTGCCGA CGACTACCTG GCCAAGCCCT TCGAGCCACG CGAGCTGATC GCCCGGATCA AGGCCGTGCT GCGTCGCCCG CAACGCCTGG ACGCACAGGC CGAAGAGCCC GCCGTGATGG ATGCGCAGCT GTTCGCCGGG TTTCGCCTGG AACACGTAAA GCGCCTGCTG ACTCGGCCCG ATGGCGAGAC CCTGACCCTG CCGCGCTCCG ACTACCGCGT ACTGCGTGAA CTGCTGGAAG CCAACAACCG CGTGGTCTCC CGCGACCAGC TGACGCGCAG TGCGTTCGGC CGCGACCACC TGCCCGACGA CCGCTCGGTT GACATGTGCG TCAGCCGCCT GCGTCAGCAA CTGCGCCGTG CACCGGCGGG GGCCGCGCAA ATCCTAACCA TCCGCAACGA AGGCTACCTG CTGAGCATCG CCAGCCACGA GGCCGATGCC TGA
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Protein sequence | MSTTLLVVDD DDEIRELLCD YLKDAGYNVL AAADGEQMRE QLARQKVELV VLDLMLPGED GLSLCRQLQA TPGLAVIMLS AKGSTLDRII GLEVGADDYL AKPFEPRELI ARIKAVLRRP QRLDAQAEEP AVMDAQLFAG FRLEHVKRLL TRPDGETLTL PRSDYRVLRE LLEANNRVVS RDQLTRSAFG RDHLPDDRSV DMCVSRLRQQ LRRAPAGAAQ ILTIRNEGYL LSIASHEADA
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