| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3924 |
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| Symbol | |
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| ID | 5210907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4908330 |
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| End bp | 4909661 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597520 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001278227 |
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| Protein GI | 148658022 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.350169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC GCATCCTGAT AGCAGATGAT GAACCGGCAG TGCGCCAGCT GCTTGAACTG
GTGTTGCGTT CTCAGGGGTA TGAGGTGGTG GCGACCCAGA ACGGCGATCA ACTCGTTCGC
ACGGCGCAGG AGTGGATTCC GGACCTGGTG ATTATCGATC TGATGATGCC GCAAATGGAC
GGGTATGAGG CGATCCGCCA ACTGCGCAAC GATACCCGCA CCGCCCACGT GCCGATGCTC
ATCCTCACCG CTCGCTCAAC TGCCGAGGAT GTGGTGACCG GGTTCGATAC CGGCGCCGAT
GATTATGTGA CCAAGCCGTT CAATATCCCC GAGTTGCTTG CCCGCATTCG AGCACATCTG
CGTCGCGCAG CGCAGACTCC GGTGCACAAT CCGCTCACCG GTCTGGCGGG GAATGTGCTC
CTGACCGAAG AGTTGAAGTA CCGCTTGAAG AATGATGCAC CATTTGCCCT GTTGTACGTC
GATCTCGATA ACTTCAAGGC ATTCAACGAC ACCTACGGAC CGGCGCGCGG TGATCGGTTG
ATCAAACTGG TTGCCGGGGT GCTTACGGAT GTGATTCAGG AGAAGGGCGC CGCCAGCGAT
TTCATCGGGC ATATCGGCGG CGACGACTTT GCAGTGCTCA CGTCGCCCGA ACGCCTCGAT
GAAATCTGCC AGGGCATTAT TGCCCTGTTT GATATGCGGG TGCGCGACCT CTACGACCCG
GAAGACCTGG CGCGCGGCTA TTTGCGTGGC GTTGATCGGC AGGGGGTGCC GCGCAATTTC
CCGATCACGA CGATTTCGAT AGGGGTGGTG ACCAACCGCC GCCGGCATTT TACCGATTAC
GAAGAGATCA GTCGCGTGGC GGCGGAGATG AAGCAGTATG CCAAGCAGTT GCCCGGCAGC
ACCTATGCGG TTGACAGTCG CAGCACCGAT GAGCAGGTTG TTGAACGTGA TCGCCGTGGT
ATGCCACTTC CACCGGCGCT CATTGTTTCC GCCGATGTCA TGCTGCGCAG CGTCATCGTC
CCGATGATCG ACAAAGCTGA TCTGCGTGCG CTTGATGCGC CGACCGTACT CGATGCCGAA
CGGTTGCTTG CCTACCATCC CGAAACAGCC CTGGTGATCG TCGATATGCG GATGGGGAAA
CAGTTGCGCG AGTTCTGTCG CAACCTGGCC ACCCATCAAC CGAAACTACC GATCATTGCG
CTCGCCGATG GAGACAGTTC CGGCATCGTC GCTCCGGGCA CAGTCAGGCA CATCCTCTCG
CTACCGCTCG ATCAGGAACA GTTGCACGCG AAGATCGTCG AAGTGCGTAG CCTGTCGCAA
AAGGCATCGT AG
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| Protein sequence | MTKRILIADD EPAVRQLLEL VLRSQGYEVV ATQNGDQLVR TAQEWIPDLV IIDLMMPQMD
GYEAIRQLRN DTRTAHVPML ILTARSTAED VVTGFDTGAD DYVTKPFNIP ELLARIRAHL
RRAAQTPVHN PLTGLAGNVL LTEELKYRLK NDAPFALLYV DLDNFKAFND TYGPARGDRL
IKLVAGVLTD VIQEKGAASD FIGHIGGDDF AVLTSPERLD EICQGIIALF DMRVRDLYDP
EDLARGYLRG VDRQGVPRNF PITTISIGVV TNRRRHFTDY EEISRVAAEM KQYAKQLPGS
TYAVDSRSTD EQVVERDRRG MPLPPALIVS ADVMLRSVIV PMIDKADLRA LDAPTVLDAE
RLLAYHPETA LVIVDMRMGK QLREFCRNLA THQPKLPIIA LADGDSSGIV APGTVRHILS
LPLDQEQLHA KIVEVRSLSQ KAS
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