| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0271 |
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| Symbol | gltR-1 |
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| ID | 1043867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 329249 |
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| End bp | 329968 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143648 |
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| Product | winged helix family two component transcriptional regulator |
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| Protein accession | NP_742438 |
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| Protein GI | 26987013 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00195642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACGA CCCTGCTGGT TGTCGATGAT GACGACGAGA TCCGCGAACT TCTTTGTGAT
TACCTGACCG ATGCCGGCTA CAACGTGCTG GCGGCAGCAG ACGGTCAACA GATGCGTGAC
CAGCTGGCCC GGCACAAAGT GGAGCTGGTG GTGCTCGACC TGATGCTGCC GGGTGAGGAC
GGCCTTAGCC TGTGCAGGCA GTTGCAGGCC ACACCTGGGT TGGCAGTGAT CATGCTGTCA
GCCAAGGGCA GCACGCTGGA CCGCATCATC GGTCTGGAAG TAGGCGCCGA CGACTATCTG
GCCAAGCCCT TCGAACCACG CGAACTGATC GCCCGGATCA AAGCCGTACT GCGTCGTCCG
CAACGCCTGG GCACCTCTGC CGAAGAACCT ATGGTGGACG CCCAGCTGTT CGCAGGCTTT
CGCCTGGAAC ACGTCAAGCG CCTGCTCACC CGCCCGGATG GCGAGACCCT GACCCTGCCG
CGCTCCGACT ACCGTGTGCT GCGCGAACTG CTGGAAGCCA ACAACCGAGT GGTCTCCCGT
GACCAACTGA CCCGCAGCGC GTTCGGCCGC GATCACCTGC CCGACGACCG CTCGGTGGAC
ATGTGTGTCA GCCGCCTGCG CCAGCAGCTG CGCCGGGCGC CGGCGGGGAC CGCGCAAATC
CTGACCATCC GTAACGAAGG CTATTTGCTG AGTCTCGCCC CCCTCGCGGC TGGTGTCTGA
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| Protein sequence | MSTTLLVVDD DDEIRELLCD YLTDAGYNVL AAADGQQMRD QLARHKVELV VLDLMLPGED
GLSLCRQLQA TPGLAVIMLS AKGSTLDRII GLEVGADDYL AKPFEPRELI ARIKAVLRRP
QRLGTSAEEP MVDAQLFAGF RLEHVKRLLT RPDGETLTLP RSDYRVLREL LEANNRVVSR
DQLTRSAFGR DHLPDDRSVD MCVSRLRQQL RRAPAGTAQI LTIRNEGYLL SLAPLAAGV
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