| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1937 |
|---|
| Symbol | |
|---|
| ID | 5195221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2209746 |
|---|
| End bp | 2210099 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640586398 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001267264 |
|---|
| Protein GI | 148547162 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.29733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA TCCTGATTGT CGATGACGAA TACCTGATCG CCGATATCCT CGGTTTTGCC
CTGGAGGACG AAGGTTTCGT GGTGGAAAAG GCGAGCAATG GCTGCAAAGC ACTGGAGGCG
TTGAAGGAAA AACGCGTGCA GCTGGTGATT ACCGACTACA TGATGCCGCT ACTCAACGGT
GAGGAGTTGG CACGCGCCAT ACGCCAGGAC CCGGCGTTAA GCGAGTTGCC GGTCATTCTC
ATGAGCGGCG CACAGGCCAG CCAAGGATGT CCGGCCCTGT TTGCCGCAAT ATTCGACAAA
CCGTTCGACA TGGATGAGAT GATCGCCACG GTGCATCAGT TAATAGGCAC CTGA
|
|---|
| Protein sequence | MNTILIVDDE YLIADILGFA LEDEGFVVEK ASNGCKALEA LKEKRVQLVI TDYMMPLLNG
EELARAIRQD PALSELPVIL MSGAQASQGC PALFAAIFDK PFDMDEMIAT VHQLIGT
|
|---|
| |