| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1587 |
|---|
| Symbol | |
|---|
| ID | 5899042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 1674567 |
|---|
| End bp | 1675352 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641562075 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001683215 |
|---|
| Protein GI | 167645552 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.367759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.752499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTT CGCAAGACCC CGCGAAGCCC GTCGCCTCGA CCGGCGCCGC CTCCACGTCG
GCCGCCGATC CGGCGCGCGG CGCCCGCATC CTGATCGTCG ACGACGATCC CGGCATCCGT
GACGTGGTCT CCGATTTCCT GGGCCGCCAC GGCTACGTCA TCGACACCGC CTCAGACTCC
CGAACCATGG AGCAAGCTCT GGCCCGAGGT CCGGTCGATC TGATCGTGCT CGACATCATG
CTGCCCGGCG AGGATGGCCT GGCCATCTGC CGCCGCCTGT CGGCCGCCGA CGGCCCCGCC
ATCATCATGC TGTCGGCCAT GGGCGAGGAG ACCGACCGGA TCGTCGGTCT GGAACTTGGC
GCCGATGACT ATCTGCCCAA GCCGTGCAAT CCGCGCGAAC TGCTGGCCCG CATCCGCGCC
GTGCTGCGTC GCCGTCAGGA ACCCCGCACC GTCGATGACG GCATGGGCGC CGCCTGCGAG
TTCGCCGGCT GGCGTCTGGA CCTGGTGCGC CGTGAACTGC GCTCGCCGCA GTCGGTCGTG
GTCAACCTGT CGAGCGGCGA GTTCTCTCTG CTGCGCGCCT TCGTCGAACG CCCGCAACGC
GTGCTGACCC GCGATCAACT GCTGGATCTG GCGCGAGGCC GTGAAAGCGA CGCCTACGAC
CGGGCCATCG ACGTCCAGAT CAGCCGCCTG CGCCGCAAGC TCGACGACGG CGGCGGCGGC
GAGCTGATCC GCACCATCCG CAGCGAAGGC TACATGTTCA CCTCCAAGGT CACCCGCACG
CCATGA
|
|---|
| Protein sequence | MESSQDPAKP VASTGAASTS AADPARGARI LIVDDDPGIR DVVSDFLGRH GYVIDTASDS
RTMEQALARG PVDLIVLDIM LPGEDGLAIC RRLSAADGPA IIMLSAMGEE TDRIVGLELG
ADDYLPKPCN PRELLARIRA VLRRRQEPRT VDDGMGAACE FAGWRLDLVR RELRSPQSVV
VNLSSGEFSL LRAFVERPQR VLTRDQLLDL ARGRESDAYD RAIDVQISRL RRKLDDGGGG
ELIRTIRSEG YMFTSKVTRT P
|
|---|
| |