Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1245 |
Symbol | |
ID | 7085409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1378919 |
End bp | 1379689 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698261 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002354900 |
Protein GI | 217969666 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0649443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGT CCGACCACAT CCTCATCGTC GACGACGACC GTGACATCCG CCAGCTGCTT GCCGACTACC TCGAGAAGCA GGGACTGCGC TGCACCACCG CGGCCGACGG GCGCGAGATG AAGGCAGCGC TCGAGACCCA CCGCATCGAC CTCATCGTGC TCGACCTGAT GATGCCCGGC GAGGATGGAC TCACCCTGTG CCGCAACCTG CGCGCGAGCG GCGGGCCGCA CGCCAACACC CCGATCCTGA TGCTCACCGC GCGCGGCGAG GACATGGACC GCATCATCGG CCTCGAGATG GGTGCCGACG ACTACCTCGC CAAGCCCTTC GTGCCGCGCG AGCTCTTCGC CCGCATCCGC GCGGTGCTGC GCCGCACCCG CGCGTTGCCG CCCAACCTCG ACGCCGCCCC GCCCGCCAAC GCGCGCCTGC TGCGCTTCGC GCACTGGCGC CTGGACACGA TCAACCGCCA CCTGGTCGAC GCCGAGGGCA CGGTGGTCGC GCTCTCCGGC GCCGAGTACC GCATGCTCGC GGTCTTCCTG TCGCACCCGC AGAAGGTGCT GTCGCGCGAC CAGCTCATGG AACTCACCCA GGGACGCGAG GCCGACGTGT TCGATCGCTC GATCGACCTG CTGGTGAGCC GGCTGCGCCA GCGCCTCGGC GACAACGCGC GCGAACCGGC GATCATCAAG ACCGTGCGCA ACGAGGGCTA CGTGCTCGCC GCCGAGGTCG TCGCCGAGAC CGCGGACACC GACGGGAGCG GCGCGCGATG A
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Protein sequence | MNTSDHILIV DDDRDIRQLL ADYLEKQGLR CTTAADGREM KAALETHRID LIVLDLMMPG EDGLTLCRNL RASGGPHANT PILMLTARGE DMDRIIGLEM GADDYLAKPF VPRELFARIR AVLRRTRALP PNLDAAPPAN ARLLRFAHWR LDTINRHLVD AEGTVVALSG AEYRMLAVFL SHPQKVLSRD QLMELTQGRE ADVFDRSIDL LVSRLRQRLG DNAREPAIIK TVRNEGYVLA AEVVAETADT DGSGAR
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