| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2268 |
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| Symbol | |
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| ID | 8808048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2387046 |
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| End bp | 2388425 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003461494 |
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| Protein GI | 289209428 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00701331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAC CGTACGTACT GGTCGTCGAC GACGAACCGG ATATCCGGAT GCTGCTGCAG
GATGTCCTCG AGGACGAGGG CTACCAGGTG GCGCTGGCCG GCTCGGTGGC CGAGGCCAAG
GCCCAGCGGC GCAGCCGCCG CCCGGATCTG ATCCTCCTCG ATGTCTGGAT GCCGGATGGC
GACGGGATCT CCCTGCTCAA GGAGTGGGGC GACGACGAGG GTCTGCCCTG TCCGGTGGTG
ATGATCTCCG GCCACGGCAA CGTGGAGACC GCCGTCGACG CCACGCGGCT GGGCGCCTAC
GACTTCATTG AAAAACCGCT GTCGATCGAC AAGCTGTTGA TCACGCTCAA CAATGCCCTG
GAGGCCGCCC GCCTGCAGCG CGAGAACGTG GGCCTGAAGC GCCATGCCGG CACGGTCGCC
GATCCGGTCG GTGGCAGCGC GGTGATGGTG AACCTGCGCG ACCAGGTGCA GCGCATGGCG
CAACACGACA CCTGGGTGCT GATCACGGGC GAGCCGGGGG TAGGCAAGCA GACCTTTGCC
CGGTTGCTGC ATGCGCGCAG TGCGCGGCGG GACAGCCCGT TCATCGTAGT CTCGGTCGGT
TCGCTGTCGG GCGACGAGGC CGTGGCCGAG CTGTTCGGCA GCGAGCAGGG CGATCGCGTG
CGCTATGGCT TGCTGGAGCA AGCCGCCGGT GGCGTGCTGT TCCTCGACGA GGTCGCCGAG
ATGGACATGC AGACACAGGG CCGGCTACTG CACGCCCTGG ACACCCAGCG CATTACCCGG
ATCGGGGGCG ATCAGCCGAT CAGTGTCAAT GTTCGGGTGA TCGCCGCCAG CCAGCACGAT
CTCGGCGAGG CGGTGGAGCA GGGCCGGTTT CGCGAGGACC TGTATTACCG GCTGAACGTC
CTGCCACTGG CGATCCCGCC GCTGCGCGAG CACGCGGAGG ACATCCCGGA GTTGCTGGAC
TACCATATGC GCCATCTGCA TCAGCAGGAA GGCCTGCCGA TGCGGCTGTT CCAGCGCCCG
GCGCTGGAGC GGCTGCAGCA GTATCAGTGG CCCGGCAACG TGCGCGAGCT GCGTAACCTG
GTGCAGCGAC TGATGATCCT CGGCTCCGGT GACGAGATCA CCCGCGACGA GGTCGAGCGC
ACCCTGACCG GCCAGCCGCA GCGCGGTGAG GAGTTCGAGG ATGGGGCACT GGCGATCCCC
GACCTGCCGC TGCGCGAGGC GCGCGAGCAG TTCGAGCGCG AGTATCTGAT CCAGCAACTG
GAGCGCTCGG AAGGCAACAT GACACGGCTG GCCGAGCGGG TGGGGCTGGA GCGCACCCAC
CTCTATCGCA AGTTCAAGGC ACTGGGCATC GATCCAAAAC GGGTGAAGGC CGACGGCTGA
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| Protein sequence | MSEPYVLVVD DEPDIRMLLQ DVLEDEGYQV ALAGSVAEAK AQRRSRRPDL ILLDVWMPDG
DGISLLKEWG DDEGLPCPVV MISGHGNVET AVDATRLGAY DFIEKPLSID KLLITLNNAL
EAARLQRENV GLKRHAGTVA DPVGGSAVMV NLRDQVQRMA QHDTWVLITG EPGVGKQTFA
RLLHARSARR DSPFIVVSVG SLSGDEAVAE LFGSEQGDRV RYGLLEQAAG GVLFLDEVAE
MDMQTQGRLL HALDTQRITR IGGDQPISVN VRVIAASQHD LGEAVEQGRF REDLYYRLNV
LPLAIPPLRE HAEDIPELLD YHMRHLHQQE GLPMRLFQRP ALERLQQYQW PGNVRELRNL
VQRLMILGSG DEITRDEVER TLTGQPQRGE EFEDGALAIP DLPLREAREQ FEREYLIQQL
ERSEGNMTRL AERVGLERTH LYRKFKALGI DPKRVKADG
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