| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1012 |
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| Symbol | gltR-2 |
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| ID | 1043979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1154135 |
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| End bp | 1154860 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144407 |
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| Product | winged helix family two component transcriptional regulator |
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| Protein accession | NP_743173 |
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| Protein GI | 26987748 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0418267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCACTG CCGGCAAATC GATCCTGATG GTCGACGACG ACCAGGAAAT CCGTGAACTG
CTGCAAACCT ACCTGAGTCG ATCCGGCTTC CAGGTGCATG CCGAGGCTGA CGGCAAGGGC
TTTCGCCACG CGCTGGAAAC CACGCCCTGC GACCTGGTCA TTCTTGACGT CATGTTGCCC
GACGAAGACG GCTTCAGCTT GTGCCGCTGG GTACGCCAGC ACCCTCGCCA GGCGCGCGTA
CCTATCATCA TGCTCACCGC CAGTTCGGAC GAGGCCGACC GGGTCATCGG CCTGGAGCTG
GGCGCTGACG ACTATCTGGG CAAGCCGTTC AGCCCCCGCG AACTGCAAGC GCGAATCAAG
GCTTTGTTGC GTCGCACCGA GTTCGGCCAG ACGGCGCCGG GCAACGCCGT GCTGGCCTTC
GACGACTGGC GCCTGGACAC GGTCAGCCAC CGCCTGTTCC ACCGTGATGG AGAGGAGGTG
ATCCTCTCCG GCGCCGACTT TGCCCTGCTC AAACTGTTCC TCGATCACCC GCAGCAAATC
CTCGACCGCG ACACCATCGG CAACGCCACC CGTGGTCGCG AACCGATGCC GTTGGACCGT
ATCGTCGACA TGGCGGTCAG CCGTCTGCGC CAGCGCCTGC GCGATACCGA CAAGCCTCCC
CGGCTGATCC GCACGGTGCG CGGCAGTGGC TACTTGTTGG CGGCACATGT CTGCTGTGCG
CCCTGA
|
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| Protein sequence | MSTAGKSILM VDDDQEIREL LQTYLSRSGF QVHAEADGKG FRHALETTPC DLVILDVMLP
DEDGFSLCRW VRQHPRQARV PIIMLTASSD EADRVIGLEL GADDYLGKPF SPRELQARIK
ALLRRTEFGQ TAPGNAVLAF DDWRLDTVSH RLFHRDGEEV ILSGADFALL KLFLDHPQQI
LDRDTIGNAT RGREPMPLDR IVDMAVSRLR QRLRDTDKPP RLIRTVRGSG YLLAAHVCCA
P
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