| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3221 |
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| Symbol | |
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| ID | 5540719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4191394 |
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| End bp | 4192725 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895342 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001433293 |
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| Protein GI | 156743164 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0497788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC GCATCCTGAT TGCAGATGAT GAGCCAGCAG TGCGCCAACT GCTCGAATTG
GTGCTGCGAT CGCAGGGATA TGAGGTTTTT GTCACGCAGA ACGGTGACCA ACTCGTGCGC
ACGGCGCAAG AATGGATCCC TGATCTCGTG ATTGTCGATC TCATGATGCC GCAGATGGAT
GGCTACGAGG CGATTCGTCA GTTGCGGAAC GATACTCGCA CCGCCCATGT GCCAATGCTC
ATTCTGACGG CGCGGTCTAC GGCGGAAGAT GTCGTCACCG GATTTGACAC TGGCGCCGAT
GATTATATCA CCAAGCCCTT CAATATTCCC GAATTGCTCG CCCGTATCCG TGCTCATTTG
CGTCGTGCAG CGCAGACGCC GGTCCATAAT CCGCTGACGG GTCTGGCAGG CAATGTGCTG
CTAACCGAGG AGTTGAAATA CCGCCTGCGC AATGGCGCGC CATTCGCGCT CCTCTATGTT
GATCTCGATA ATTTCAAGGC ATTTAACGAT ACGTATGGTC CGGCGCGCGG TGATCGGTTG
ATCAAGATGG TCGCCGATGT ATTGTTGGAG GTGGTGCATC AACACGGCTC GTCGAGCGAC
TTTATCGGGC ATATCGGCGG GGACGACTTT GCCATTCTGA CGACGCCGGA TCGTCTCGAT
GCGATCTGCC AGGGTGTGAT TGCGCTATTC GATAAGCGGG TGCGCGATCT GTACGATCCA
GAAGACCTGG CGCGCGGGTA TCTGCGCGGC GTGGATCGCC AGGGAGTGCC GAGGAACTTT
CCGATCACCA CGATCTCAAT TGGAGTGGTG ACCAACCGAC GTCGTCGCTT TGCCGATTAT
GACGAAGTCA GCCGGATCGC GGCAGAGATG AAGCAATATG CCAAACAGTT GCCTGGCAGC
ACCTATGCGG TGGATGTTCG CGGCGTCAGT GAACAGGTGG TTGAGCGCGA TCGTCGCAAG
TCTCCGCCGC CGCCGGCGCT GATTGTGTCT GCGGATGCGC TTTTGCGCAG TGCCATCGCT
CCCTTGCTCG ACGAGATAGA CCTGCGCGCG CTTGATGCGC CGACGGTGCT TGATGCCGAA
CGGTTGCTGG CGTACCATCC CGAAATGGCG CTGGTCATCG TTGATGGGCG TATGGGAAAG
CCGGTGCGTG ATTTCTGCAC AAATCTGGCG CAACATCAAC CGAACCTTCC GGTTATTGCG
CTGACCGATC AACCAACGTC GGGGATTATC GCGCCAGGCG CGGTCAGGCA CATTCTTCCC
TTACCCGTTG ACAGCGTCCA ATTGCGTGTG CGGATTGTCG ATGTGCGTCG CGCTTCGCAG
GAGACGTCGT GA
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| Protein sequence | MTKRILIADD EPAVRQLLEL VLRSQGYEVF VTQNGDQLVR TAQEWIPDLV IVDLMMPQMD
GYEAIRQLRN DTRTAHVPML ILTARSTAED VVTGFDTGAD DYITKPFNIP ELLARIRAHL
RRAAQTPVHN PLTGLAGNVL LTEELKYRLR NGAPFALLYV DLDNFKAFND TYGPARGDRL
IKMVADVLLE VVHQHGSSSD FIGHIGGDDF AILTTPDRLD AICQGVIALF DKRVRDLYDP
EDLARGYLRG VDRQGVPRNF PITTISIGVV TNRRRRFADY DEVSRIAAEM KQYAKQLPGS
TYAVDVRGVS EQVVERDRRK SPPPPALIVS ADALLRSAIA PLLDEIDLRA LDAPTVLDAE
RLLAYHPEMA LVIVDGRMGK PVRDFCTNLA QHQPNLPVIA LTDQPTSGII APGAVRHILP
LPVDSVQLRV RIVDVRRASQ ETS
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