Gene Rpic12D_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3348 
Symbol 
ID8021033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3531148 
End bp3531861 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID644832142 
Producttwo component transcriptional regulator, Fis family 
Protein accessionYP_002983284 
Protein GI241664924 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TCCTCGTTGT CGACGACGAA ATGGGTATCC GGGAGTTGCT CTCCGAAATC 
CTCGGAGACG AAGGGCACGT TGTTGAAGTC GCCGAGAACG CGCAGCGCGC GCGCGAATAC
CGCGCGAACG CAACGCCCGA CCTCGTCCTG CTCGATATCT GGATGCCGGA TACCGACGGC
GTGACGCTGC TCAAGGAATG GGCGTCGCAA GGTCTGCTGA CCATGCCCGT CATCATGATG
TCGGGCCACG CCACCATCGA CACCGCCGTC GAGGCGACCA AGATCGGCGC GCTGAATTTC
CTGGAGAAGC CCATCGCGCT GCAGAAACTG CTGACGGCGG TGGAGCAGGG CCTGTCGCGC
AGCAAGGAAA AGCCACGCTC GGCGACACAG GCTGCCGCTC CGGTGACGGG ACTCGCAGGC
GCCATGCCCA ACGCCGCCGC AGCAGGTACG CCTGCCGCGC TCGAGCGCAC CGATATCAAT
GGCGTGCCGA CCCGTGCAGC CGAAGGCGGC GGCATGCAGT TCTCGTTCGA CATGCCGCTG
CGCGAGGCGC GCGACCTGTT TGAGCGCGCC TACTTCGAAT ACCACCTGCA GCGTGAAGGC
GGCAGCATGA CGCGCGTGGC AGAAAAGACC GGTCTGGAGC GGACTCACCT GTACCGCAAG
CTCAAGCAAC TGGGCGTCGA ACTCTCGCGC AACAAGGGCG AGCCGGCGGC GTGA
 
Protein sequence
MATILVVDDE MGIRELLSEI LGDEGHVVEV AENAQRAREY RANATPDLVL LDIWMPDTDG 
VTLLKEWASQ GLLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LTAVEQGLSR
SKEKPRSATQ AAAPVTGLAG AMPNAAAAGT PAALERTDIN GVPTRAAEGG GMQFSFDMPL
REARDLFERA YFEYHLQREG GSMTRVAEKT GLERTHLYRK LKQLGVELSR NKGEPAA