Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3348 |
Symbol | |
ID | 8021033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3531148 |
End bp | 3531861 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832142 |
Product | two component transcriptional regulator, Fis family |
Protein accession | YP_002983284 |
Protein GI | 241664924 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA TCCTCGTTGT CGACGACGAA ATGGGTATCC GGGAGTTGCT CTCCGAAATC CTCGGAGACG AAGGGCACGT TGTTGAAGTC GCCGAGAACG CGCAGCGCGC GCGCGAATAC CGCGCGAACG CAACGCCCGA CCTCGTCCTG CTCGATATCT GGATGCCGGA TACCGACGGC GTGACGCTGC TCAAGGAATG GGCGTCGCAA GGTCTGCTGA CCATGCCCGT CATCATGATG TCGGGCCACG CCACCATCGA CACCGCCGTC GAGGCGACCA AGATCGGCGC GCTGAATTTC CTGGAGAAGC CCATCGCGCT GCAGAAACTG CTGACGGCGG TGGAGCAGGG CCTGTCGCGC AGCAAGGAAA AGCCACGCTC GGCGACACAG GCTGCCGCTC CGGTGACGGG ACTCGCAGGC GCCATGCCCA ACGCCGCCGC AGCAGGTACG CCTGCCGCGC TCGAGCGCAC CGATATCAAT GGCGTGCCGA CCCGTGCAGC CGAAGGCGGC GGCATGCAGT TCTCGTTCGA CATGCCGCTG CGCGAGGCGC GCGACCTGTT TGAGCGCGCC TACTTCGAAT ACCACCTGCA GCGTGAAGGC GGCAGCATGA CGCGCGTGGC AGAAAAGACC GGTCTGGAGC GGACTCACCT GTACCGCAAG CTCAAGCAAC TGGGCGTCGA ACTCTCGCGC AACAAGGGCG AGCCGGCGGC GTGA
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Protein sequence | MATILVVDDE MGIRELLSEI LGDEGHVVEV AENAQRAREY RANATPDLVL LDIWMPDTDG VTLLKEWASQ GLLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LTAVEQGLSR SKEKPRSATQ AAAPVTGLAG AMPNAAAAGT PAALERTDIN GVPTRAAEGG GMQFSFDMPL REARDLFERA YFEYHLQREG GSMTRVAEKT GLERTHLYRK LKQLGVELSR NKGEPAA
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