More than 300 homologs were found in PanDaTox collection
for query gene Daci_0172 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  100 
 
 
550 aa  1105    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
650 aa  498  1e-139  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  50.81 
 
 
559 aa  434  1e-120  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  47.57 
 
 
583 aa  409  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  48.1 
 
 
513 aa  410  1e-113  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  63.06 
 
 
559 aa  407  1.0000000000000001e-112  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  50.2 
 
 
592 aa  401  9.999999999999999e-111  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  47.51 
 
 
572 aa  394  1e-108  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  46.36 
 
 
543 aa  389  1e-107  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
513 aa  390  1e-107  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  46.11 
 
 
542 aa  389  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  47.96 
 
 
575 aa  387  1e-106  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
549 aa  385  1e-105  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  45.98 
 
 
569 aa  384  1e-105  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
581 aa  383  1e-105  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  49.44 
 
 
586 aa  381  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
579 aa  382  1e-104  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  51.31 
 
 
577 aa  381  1e-104  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
576 aa  377  1e-103  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
552 aa  378  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
589 aa  374  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
595 aa  373  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  63.72 
 
 
578 aa  372  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  48.17 
 
 
614 aa  374  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  45.8 
 
 
557 aa  373  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
551 aa  371  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
551 aa  371  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
570 aa  370  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  47.42 
 
 
579 aa  370  1e-101  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  62.82 
 
 
522 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  62.82 
 
 
522 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
554 aa  368  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  49.15 
 
 
516 aa  367  1e-100  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
535 aa  366  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  48.3 
 
 
525 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  64.92 
 
 
580 aa  369  1e-100  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
537 aa  365  1e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
553 aa  365  1e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  56.86 
 
 
579 aa  364  2e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  62.61 
 
 
527 aa  364  2e-99  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  66.13 
 
 
585 aa  363  3e-99  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.75 
 
 
598 aa  363  4e-99  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  62.38 
 
 
589 aa  362  7.0000000000000005e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
605 aa  362  7.0000000000000005e-99  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
596 aa  362  1e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  65.14 
 
 
433 aa  361  2e-98  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  45.15 
 
 
613 aa  360  3e-98  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  46.51 
 
 
620 aa  360  4e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  63.86 
 
 
537 aa  359  6e-98  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  46.48 
 
 
584 aa  359  7e-98  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  60.56 
 
 
587 aa  358  9.999999999999999e-98  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  53.41 
 
 
615 aa  356  5e-97  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  53.41 
 
 
615 aa  356  5e-97  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  51.06 
 
 
584 aa  355  8.999999999999999e-97  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  45.51 
 
 
520 aa  355  1e-96  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  45.92 
 
 
608 aa  355  1e-96  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  65.56 
 
 
680 aa  355  1e-96  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
540 aa  354  2e-96  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  45.24 
 
 
548 aa  354  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  65.15 
 
 
598 aa  354  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  64.14 
 
 
471 aa  354  2.9999999999999997e-96  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.04 
 
 
566 aa  353  4e-96  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
588 aa  353  5e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  62.76 
 
 
589 aa  352  8.999999999999999e-96  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  46.36 
 
 
573 aa  352  1e-95  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
591 aa  352  1e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  61.7 
 
 
559 aa  352  1e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
601 aa  352  1e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
508 aa  351  2e-95  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  55.92 
 
 
554 aa  350  3e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  61.13 
 
 
653 aa  350  5e-95  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  61.13 
 
 
653 aa  350  5e-95  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0495  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
525 aa  349  6e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  61.13 
 
 
584 aa  349  7e-95  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
565 aa  349  8e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  57.18 
 
 
547 aa  349  8e-95  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
540 aa  348  1e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
523 aa  348  1e-94  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  57.51 
 
 
547 aa  347  2e-94  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  57.18 
 
 
547 aa  348  2e-94  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
580 aa  348  2e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  48.01 
 
 
592 aa  348  2e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  57.18 
 
 
547 aa  348  2e-94  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  53.39 
 
 
562 aa  347  3e-94  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  57.18 
 
 
547 aa  347  3e-94  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.47 
 
 
584 aa  347  4e-94  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008752  Aave_0940  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
546 aa  347  5e-94  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000958657  normal  0.647876 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  50 
 
 
565 aa  346  6e-94  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  45.94 
 
 
536 aa  346  6e-94  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
511 aa  346  7e-94  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  43.06 
 
 
562 aa  345  8e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  62.42 
 
 
586 aa  345  8.999999999999999e-94  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  43.06 
 
 
562 aa  345  1e-93  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
554 aa  345  1e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  55.4 
 
 
552 aa  344  2e-93  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  62.46 
 
 
578 aa  344  2e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  54.7 
 
 
594 aa  345  2e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  54.75 
 
 
652 aa  343  2.9999999999999997e-93  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2789  methyl-accepting chemotaxis sensory transducer  65.9 
 
 
529 aa  343  4e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.017789  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
547 aa  343  5e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
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