More than 300 homologs were found in PanDaTox collection
for query gene Bfae_30840 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  100 
 
 
463 aa  934    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1527  extracellular solute-binding protein family 1  60.22 
 
 
465 aa  537  1e-151  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.922727  normal  0.377984 
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  39.35 
 
 
451 aa  289  6e-77  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  37.35 
 
 
448 aa  273  6e-72  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  32.9 
 
 
450 aa  206  8e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  30.65 
 
 
470 aa  186  7e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  33.01 
 
 
460 aa  185  1.0000000000000001e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  32.09 
 
 
455 aa  184  2.0000000000000003e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009565  TBFG_12848  sn-glycerol-3-phosphate-binding lipoprotein ugpB  31.46 
 
 
436 aa  182  8.000000000000001e-45  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000142723  normal 
 
 
-
 
NC_013174  Jden_2244  extracellular solute-binding protein family 1  31 
 
 
455 aa  181  2.9999999999999997e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.846858 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  31.25 
 
 
453 aa  178  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  32.65 
 
 
436 aa  174  1.9999999999999998e-42  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  31.19 
 
 
453 aa  174  1.9999999999999998e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  30.75 
 
 
468 aa  170  5e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29870  carbohydrate-binding protein  29.53 
 
 
448 aa  170  5e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  30.33 
 
 
448 aa  165  2.0000000000000002e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  28.57 
 
 
445 aa  132  1.0000000000000001e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  27.73 
 
 
462 aa  123  6e-27  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  28.07 
 
 
435 aa  116  6.9999999999999995e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  26.35 
 
 
436 aa  116  8.999999999999998e-25  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  26.26 
 
 
437 aa  115  2.0000000000000002e-24  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  25.05 
 
 
439 aa  114  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26.57 
 
 
414 aa  114  3e-24  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  26.26 
 
 
437 aa  114  5e-24  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  25.83 
 
 
458 aa  111  3e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.24 
 
 
458 aa  111  3e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.24 
 
 
458 aa  111  3e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.24 
 
 
458 aa  111  3e-23  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.24 
 
 
458 aa  110  4.0000000000000004e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.24 
 
 
458 aa  110  4.0000000000000004e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.24 
 
 
458 aa  110  4.0000000000000004e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26 
 
 
458 aa  109  1e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  25.98 
 
 
458 aa  109  1e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  27.25 
 
 
439 aa  106  7e-22  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  26.08 
 
 
431 aa  106  7e-22  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  25.72 
 
 
444 aa  106  7e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  26.18 
 
 
439 aa  106  8e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  26.18 
 
 
439 aa  106  8e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1068  extracellular solute-binding protein  24.88 
 
 
429 aa  105  1e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.501776  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  26.18 
 
 
439 aa  105  1e-21  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.77 
 
 
458 aa  105  1e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6261  extracellular solute-binding protein family 1  26.95 
 
 
428 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.689417 
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  26.52 
 
 
438 aa  104  3e-21  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  26.3 
 
 
439 aa  105  3e-21  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  104  3e-21  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  25.82 
 
 
431 aa  103  5e-21  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3686  extracellular solute-binding protein  26.12 
 
 
460 aa  103  8e-21  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  26.28 
 
 
438 aa  103  9e-21  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  26.28 
 
 
438 aa  103  9e-21  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  103  9e-21  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  103  9e-21  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  103  9e-21  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  26.28 
 
 
438 aa  103  9e-21  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  26.18 
 
 
444 aa  103  9e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  26.03 
 
 
438 aa  102  2e-20  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  25.42 
 
 
440 aa  101  3e-20  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.96 
 
 
431 aa  100  4e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  25.46 
 
 
437 aa  100  4e-20  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  26.76 
 
 
439 aa  100  5e-20  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  100  7e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  100  7e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  100  7e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  26.23 
 
 
438 aa  99.8  8e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  26.57 
 
 
438 aa  99.4  1e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  25.77 
 
 
435 aa  98.6  2e-19  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  25.98 
 
 
438 aa  96.7  7e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.02 
 
 
441 aa  96.7  8e-19  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0129  extracellular solute-binding protein family 1  27.43 
 
 
426 aa  95.1  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.57996  n/a   
 
 
-
 
NC_007958  RPD_3151  extracellular solute-binding protein  27.03 
 
 
426 aa  95.1  2e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.345086 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  24.75 
 
 
445 aa  94.7  3e-18  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_007778  RPB_4664  extracellular solute-binding protein  25.75 
 
 
448 aa  95.1  3e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.593429 
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  24.88 
 
 
440 aa  94.7  3e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.96 
 
 
425 aa  94.4  4e-18  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  26.39 
 
 
441 aa  94  5e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  25.95 
 
 
441 aa  93.6  6e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  25.71 
 
 
441 aa  93.6  7e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  26.89 
 
 
440 aa  93.2  9e-18  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  25.3 
 
 
445 aa  92.8  1e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_007958  RPD_4373  extracellular solute-binding protein  26.74 
 
 
437 aa  92.8  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.104197  normal 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  25.24 
 
 
433 aa  92.8  1e-17  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  24.68 
 
 
420 aa  92.8  1e-17  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  24.1 
 
 
437 aa  92  2e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  30.57 
 
 
435 aa  92  2e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  25 
 
 
419 aa  92  2e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4449  extracellular solute-binding protein  26.92 
 
 
446 aa  92.4  2e-17  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00843107  normal  0.115126 
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.15 
 
 
433 aa  91.3  3e-17  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
NC_009952  Dshi_2014  sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor  25.37 
 
 
433 aa  91.7  3e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.167012  hitchhiker  0.0071297 
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
441 aa  91.3  3e-17  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
441 aa  91.3  3e-17  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  24.64 
 
 
436 aa  91.3  3e-17  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  25.46 
 
 
468 aa  91.7  3e-17  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
441 aa  91.3  3e-17  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
441 aa  91.3  3e-17  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
441 aa  91.3  3e-17  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  25.48 
 
 
441 aa  91.3  4e-17  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0255  extracellular solute-binding protein family 1  26.53 
 
 
439 aa  91.3  4e-17  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  24.53 
 
 
419 aa  90.9  4e-17  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  25.06 
 
 
438 aa  90.5  6e-17  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0174  extracellular solute-binding protein  26.7 
 
 
426 aa  90.5  6e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.396862  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  27.93 
 
 
452 aa  90.5  6e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
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