More than 300 homologs were found in PanDaTox collection
for query gene Synpcc7942_0235 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007604  Synpcc7942_0235  cyclic nucleotide-binding domain-containing protein  100 
 
 
171 aa  344  3e-94  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.742856 
 
 
-
 
NC_011884  Cyan7425_1179  cyclic nucleotide-binding protein  43.79 
 
 
213 aa  174  5e-43  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0236  cyclic nucleotide-binding domain-containing protein  46.2 
 
 
179 aa  168  4e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.754806 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  35.65 
 
 
224 aa  80.9  0.000000000000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  35.19 
 
 
242 aa  76.3  0.0000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  40.54 
 
 
225 aa  76.3  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  40.54 
 
 
225 aa  75.5  0.0000000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  34.23 
 
 
226 aa  72.8  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  36.7 
 
 
228 aa  72  0.000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  33.03 
 
 
228 aa  71.6  0.000000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  37.78 
 
 
225 aa  70.1  0.00000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  36.84 
 
 
230 aa  68.6  0.00000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  33.03 
 
 
228 aa  66.2  0.0000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  33.33 
 
 
224 aa  66.2  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  33.03 
 
 
226 aa  65.5  0.0000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  35.79 
 
 
228 aa  65.9  0.0000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  35.87 
 
 
226 aa  65.1  0.0000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  34.78 
 
 
225 aa  63.5  0.000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  35.56 
 
 
225 aa  63.5  0.000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  35.48 
 
 
224 aa  63.5  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  28.48 
 
 
234 aa  63.9  0.000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  34.78 
 
 
226 aa  63.2  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  36.56 
 
 
232 aa  62.4  0.000000003  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007948  Bpro_0718  cyclic nucleotide-binding  30.83 
 
 
747 aa  62.4  0.000000003  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00567448  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  29.63 
 
 
243 aa  62  0.000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  40.23 
 
 
224 aa  61.6  0.000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  31.13 
 
 
249 aa  62  0.000000004  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  33.71 
 
 
236 aa  61.6  0.000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0496  cyclic nucleotide-binding domain-containing protein  40 
 
 
129 aa  61.2  0.000000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  31.18 
 
 
225 aa  60.8  0.000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  32.95 
 
 
224 aa  60.8  0.000000009  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  30.11 
 
 
224 aa  60.8  0.000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3367  Crp/FNR family transcriptional regulator  31.13 
 
 
230 aa  60.8  0.000000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0097  putative transcriptional regulator, Crp/Fnr family  30.88 
 
 
329 aa  60.5  0.00000001  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000000000120969  n/a   
 
 
-
 
NC_007908  Rfer_3511  Crp/FNR family transcriptional regulator  31.19 
 
 
233 aa  60.1  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  32.22 
 
 
219 aa  60.5  0.00000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  34.44 
 
 
226 aa  59.3  0.00000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4460  putative transcriptional regulator, Crp/Fnr family  36.9 
 
 
171 aa  59.7  0.00000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  35.56 
 
 
235 aa  58.9  0.00000003  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  26.13 
 
 
225 aa  58.9  0.00000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.45 
 
 
225 aa  58.5  0.00000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4730  cyclic nucleotide-binding protein  34 
 
 
286 aa  58.9  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.813554  normal  0.722063 
 
 
-
 
NC_008390  Bamb_2589  Crp/FNR family transcriptional regulator  35.56 
 
 
235 aa  58.5  0.00000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.0679634  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  27.96 
 
 
224 aa  58.2  0.00000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  31.82 
 
 
224 aa  58.2  0.00000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  34.44 
 
 
235 aa  58.5  0.00000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_008060  Bcen_1929  Crp/FNR family transcriptional regulator  34.44 
 
 
235 aa  58.5  0.00000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.589711  n/a   
 
 
-
 
NC_008542  Bcen2424_2541  Crp/FNR family transcriptional regulator  34.44 
 
 
235 aa  58.5  0.00000005  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000812643  n/a   
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  31.82 
 
 
224 aa  58.2  0.00000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  35.23 
 
 
224 aa  57.8  0.00000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  32.08 
 
 
251 aa  57.4  0.00000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_007492  Pfl01_1398  cyclic nucleotide-binding protein  32.18 
 
 
157 aa  57  0.0000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.908167  normal 
 
 
-
 
NC_007494  RSP_3707  hypothetical protein  34.94 
 
 
563 aa  57.4  0.0000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.78076  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  27.52 
 
 
220 aa  57  0.0000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_007510  Bcep18194_A5872  Crp/FNR family transcriptional regulator  36.05 
 
 
235 aa  56.6  0.0000001  Burkholderia sp. 383  Bacteria  normal  0.142608  normal  0.264846 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  30.68 
 
 
224 aa  57  0.0000001  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  30.68 
 
 
224 aa  57  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  30.68 
 
 
224 aa  57  0.0000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3442  cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.94 
 
 
563 aa  57.4  0.0000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.352677  normal  0.0673657 
 
 
-
 
NC_010501  PputW619_3891  cyclic nucleotide-binding protein  33.33 
 
 
155 aa  56.6  0.0000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  30.68 
 
 
224 aa  56.6  0.0000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  28.41 
 
 
224 aa  56.6  0.0000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  29.84 
 
 
223 aa  56.2  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  34.83 
 
 
226 aa  55.8  0.0000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  32.77 
 
 
250 aa  55.8  0.0000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  27.83 
 
 
225 aa  55.8  0.0000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  28.57 
 
 
224 aa  55.5  0.0000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  32.61 
 
 
234 aa  55.1  0.0000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  27.93 
 
 
225 aa  55.5  0.0000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  34.15 
 
 
220 aa  55.1  0.0000005  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_007298  Daro_3904  cyclic nucleotide-binding:Sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulphate transporter  37.5 
 
 
736 aa  55.1  0.0000005  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011669  PHATRDRAFT_3120  predicted protein  32.53 
 
 
241 aa  55.1  0.0000005  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  32.58 
 
 
226 aa  55.1  0.0000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  28.89 
 
 
225 aa  55.1  0.0000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  31.82 
 
 
230 aa  54.7  0.0000006  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  31.82 
 
 
230 aa  54.7  0.0000006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  31.82 
 
 
230 aa  54.7  0.0000006  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  31.82 
 
 
230 aa  54.7  0.0000006  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_008044  TM1040_2678  cyclic nucleotide-binding protein  32.65 
 
 
1017 aa  54.7  0.0000006  Ruegeria sp. TM1040  Bacteria  normal  0.0916435  normal 
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  31.82 
 
 
229 aa  54.7  0.0000007  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0894  cyclic nucleotide-binding  29.35 
 
 
226 aa  54.7  0.0000007  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  31.82 
 
 
229 aa  54.7  0.0000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  31.82 
 
 
229 aa  54.3  0.0000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  31.82 
 
 
229 aa  54.7  0.0000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2535  CRP/FNR family transcriptional regulator  28.12 
 
 
226 aa  54.3  0.0000008  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  32.58 
 
 
254 aa  53.9  0.000001  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_002967  TDE2616  cyclic nucleotide-binding protein  28.7 
 
 
219 aa  53.9  0.000001  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  32.58 
 
 
254 aa  53.9  0.000001  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  33.71 
 
 
254 aa  53.9  0.000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  32.22 
 
 
231 aa  53.1  0.000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  30.49 
 
 
252 aa  52.8  0.000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  26.13 
 
 
225 aa  52.8  0.000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1108  putative transcriptional regulator, Crp/Fnr family  25.81 
 
 
1075 aa  52.8  0.000002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000733786  normal  0.267995 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  27.14 
 
 
225 aa  52.8  0.000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0841  cyclic nucleotide-binding protein  27.45 
 
 
160 aa  52.8  0.000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.108052 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  25.49 
 
 
229 aa  53.1  0.000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0755  Crp/FNR family transcriptional regulator  33.71 
 
 
235 aa  53.1  0.000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.027549  normal  0.149867 
 
 
-
 
NC_004578  PSPTO_3912  cyclic nucleotide-binding protein  30.59 
 
 
144 aa  52.8  0.000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.262178  n/a   
 
 
-
 
NC_007005  Psyr_1573  cyclic nucleotide-binding  30.59 
 
 
158 aa  52.4  0.000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.490025  hitchhiker  0.00990577 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  32.22 
 
 
229 aa  52.4  0.000003  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
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