Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3912 |
Symbol | |
ID | 1185585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4427438 |
End bp | 4427872 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395264 |
Product | cyclic nucleotide-binding protein |
Protein accession | NP_793683 |
Protein GI | 28871064 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.262178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGG ACTGCGGCCT GTTCGACACC TTGCTGCCCG GTGACTTTGT CACTGTGGCC GGGTACTTCA GCATCACCGA TATCGAAAAA GGCGAAACCA TCTTTGCCGA AGGCGATGCC GGGACCTTCA TGTGCATCAT CCATCAGGGC AGCGTATCGG TGCAGAAACT GGCCGGTGAC GGTCAACAGG TGGAGATCGC CGTGCTGCGC CGCGGACGTG CATTCGGGGA GATGGCCGTA CTGGATGGCG AACGTCGCTC GGCCAGCTGT ATTGCGGCCA CCAGTTGCCA GTTACTGAAT CTGGGGCGCG ACTCGCTGGA CAAGATGCTC GACGATGCGC CGAAAATCGC CGCCAAGATC ATTCGCGCCC TGGCCATCTC GCTGTCCAAG CGCTTGCGCA TGGTCGACGG CCAATTACTT TCGCAGCAGG TGTGA
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Protein sequence | MLLDCGLFDT LLPGDFVTVA GYFSITDIEK GETIFAEGDA GTFMCIIHQG SVSVQKLAGD GQQVEIAVLR RGRAFGEMAV LDGERRSASC IAATSCQLLN LGRDSLDKML DDAPKIAAKI IRALAISLSK RLRMVDGQLL SQQV
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