Gene PSPTO_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3912 
Symbol 
ID1185585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4427438 
End bp4427872 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content60% 
IMG OID637395264 
Productcyclic nucleotide-binding protein 
Protein accessionNP_793683 
Protein GI28871064 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.262178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGG ACTGCGGCCT GTTCGACACC TTGCTGCCCG GTGACTTTGT CACTGTGGCC 
GGGTACTTCA GCATCACCGA TATCGAAAAA GGCGAAACCA TCTTTGCCGA AGGCGATGCC
GGGACCTTCA TGTGCATCAT CCATCAGGGC AGCGTATCGG TGCAGAAACT GGCCGGTGAC
GGTCAACAGG TGGAGATCGC CGTGCTGCGC CGCGGACGTG CATTCGGGGA GATGGCCGTA
CTGGATGGCG AACGTCGCTC GGCCAGCTGT ATTGCGGCCA CCAGTTGCCA GTTACTGAAT
CTGGGGCGCG ACTCGCTGGA CAAGATGCTC GACGATGCGC CGAAAATCGC CGCCAAGATC
ATTCGCGCCC TGGCCATCTC GCTGTCCAAG CGCTTGCGCA TGGTCGACGG CCAATTACTT
TCGCAGCAGG TGTGA
 
Protein sequence
MLLDCGLFDT LLPGDFVTVA GYFSITDIEK GETIFAEGDA GTFMCIIHQG SVSVQKLAGD 
GQQVEIAVLR RGRAFGEMAV LDGERRSASC IAATSCQLLN LGRDSLDKML DDAPKIAAKI
IRALAISLSK RLRMVDGQLL SQQV