92 homologs were found in PanDaTox collection
for query gene Rleg2_4910 on replicon NC_011368
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011368  Rleg2_4910  Substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 333 aa  676    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012848  Rleg_4822  Substrate-binding region of ABC-type glycine betaine transport system  92.79 
 
 		 333 aa  637    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_4889  substrate-binding region of ABC-type glycine betaine transport system  84.08 
 
 		 333 aa  583  1.0000000000000001e-165  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.64177 
 
 
-
 
NC_009636  Smed_0650  substrate-binding region of ABC-type glycine betaine transport system  75.08 
 
 		 332 aa  523  1e-147  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.324621 
 
 
-
 
NC_008686  Pden_1195  substrate-binding region of ABC-type glycine betaine transport system  65.06 
 
 		 333 aa  456  1e-127  Paracoccus denitrificans PD1222  Bacteria  normal  0.353421  normal  1 
 
 
-
 
NC_011369  Rleg2_2919  Substrate-binding region of ABC-type glycine betaine transport system  65.17 
 
 		 333 aa  457  1e-127  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0603439  normal  1 
 
 
-
 
NC_008686  Pden_0945  substrate-binding region of ABC-type glycine betaine transport system  65.06 
 
 		 333 aa  456  1e-127  Paracoccus denitrificans PD1222  Bacteria  normal  0.249192  normal  1 
 
 
-
 
NC_011989  Avi_2573  ABC transporter substrate binding protein  54.95 
 
 		 332 aa  399  9.999999999999999e-111  Agrobacterium vitis S4  Bacteria  normal  0.0219871  n/a   
 
 
-
 
NC_009636  Smed_1767  substrate-binding region of ABC-type glycine betaine transport system  53.45 
 
 		 332 aa  367  1e-100  Sinorhizobium medicae WSM419  Bacteria  normal  0.473646  normal  0.0264882 
 
 
-
 
NC_009050  Rsph17029_3787  substrate-binding region of ABC-type glycine betaine transport system  53.73 
 
 		 333 aa  359  3e-98  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.347149 
 
 
-
 
NC_007494  RSP_3059  ABC proline/glycine betaine transporter, periplasmic substrate-binding protein  53.73 
 
 		 333 aa  356  2.9999999999999997e-97  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.78778  n/a   
 
 
-
 
NC_009428  Rsph17025_2828  substrate-binding region of ABC-type glycine betaine transport system  52.03 
 
 		 333 aa  341  1e-92  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.23634 
 
 
-
 
NC_012850  Rleg_2382  Substrate-binding region of ABC-type glycine betaine transport system  50.16 
 
 		 331 aa  339  4e-92  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0539771  hitchhiker  0.00933627 
 
 
-
 
NC_008687  Pden_3856  substrate-binding region of ABC-type glycine betaine transport system  49.25 
 
 		 331 aa  335  5e-91  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.215076 
 
 
-
 
NC_011369  Rleg2_2138  Substrate-binding region of ABC-type glycine betaine transport system  49.84 
 
 		 331 aa  335  7e-91  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0458223  normal  0.188194 
 
 
-
 
NC_009784  VIBHAR_06562  hypothetical protein  49.52 
 
 		 330 aa  323  3e-87  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1845  substrate-binding region of ABC-type glycine betaine transport system  45.05 
 
 		 334 aa  320  1.9999999999999998e-86  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00000186809  normal  0.0102549 
 
 
-
 
NC_009901  Spea_0257  substrate-binding region of ABC-type glycine betaine transport system  44.66 
 
 		 334 aa  300  2e-80  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4235  ABC transporter substrate-binding protein  45.08 
 
 		 334 aa  300  3e-80  Shewanella sediminis HAW-EB3  Bacteria  normal  0.663539  hitchhiker  0.000000168008 
 
 
-
 
NC_013457  VEA_001569  putative periplasmic substrate-binding protein  44.13 
 
 		 331 aa  293  3e-78  Vibrio sp. Ex25  Bacteria  normal  0.496991  n/a   
 
 
-
 
NC_003910  CPS_4933  amino acid ABC transporter, periplasmic amino acid-binding protein  38.71 
 
 		 323 aa  244  9.999999999999999e-64  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1285  Substrate-binding region of ABC-type glycine betaine transport system  34.59 
 
 		 334 aa  195  7e-49  Meiothermus ruber DSM 1279  Bacteria  normal  0.435568  normal  0.230718 
 
 
-
 
NC_007492  Pfl01_3319  substrate-binding region of ABC-type glycine betaine transport system  31.87 
 
 		 337 aa  182  5.0000000000000004e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_5836  hypothetical protein  31.7 
 
 		 356 aa  172  5.999999999999999e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3778  substrate-binding region of ABC-type glycine betaine transport system  30.41 
 
 		 337 aa  171  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.110017 
 
 
-
 
NC_008463  PA14_67400  putative ABC transporter, periplasmic substrate-binding protein  31.05 
 
 		 340 aa  170  3e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_1086  substrate-binding region of ABC-type glycine betaine transport system  31.17 
 
 		 646 aa  166  5.9999999999999996e-40  Psychrobacter cryohalolentis K5  Bacteria  normal  0.809733  normal  0.592465 
 
 
-
 
NC_007492  Pfl01_4344  substrate-binding region of ABC-type glycine betaine transport system  30.43 
 
 		 337 aa  165  1.0000000000000001e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2583  substrate-binding region of ABC-type glycine betaine transport system  33.64 
 
 		 344 aa  161  1e-38  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.201596 
 
 
-
 
NC_009719  Plav_1066  substrate-binding region of ABC-type glycine betaine transport system  31.19 
 
 		 633 aa  159  6e-38  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_2216  substrate-binding region of ABC-type glycine betaine transport system  29.5 
 
 		 338 aa  159  8e-38  Pseudomonas putida F1  Bacteria  normal  0.228946  normal  1 
 
 
-
 
NC_002947  PP_3558  substrate-binding region of ABC-type glycine betaine transport system  29.24 
 
 		 338 aa  158  1e-37  Pseudomonas putida KT2440  Bacteria  normal  0.561868  normal  1 
 
 
-
 
NC_009524  PsycPRwf_1376  substrate-binding region of ABC-type glycine betaine transport system  30.65 
 
 		 652 aa  157  2e-37  Psychrobacter sp. PRwf-1  Bacteria  normal  1  hitchhiker  0.000369923 
 
 
-
 
NC_004578  PSPTO_5271  histidine transporter, periplasmic histidine-binding protein  30.92 
 
 		 322 aa  155  1e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_5830  ABC transporter periplasmic binding protein  28.99 
 
 		 322 aa  154  2e-36  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_0802  substrate-binding region of ABC-type glycine betaine transport system  29.59 
 
 		 321 aa  153  4e-36  Serratia proteamaculans 568  Bacteria  normal  0.0332812  normal  1 
 
 
-
 
NC_007005  Psyr_4829  substrate-binding region of ABC-type glycine betaine transport system  30.64 
 
 		 322 aa  153  5e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.93299 
 
 
-
 
NC_008463  PA14_67300  putative binding protein component of ABC transporter  28.89 
 
 		 322 aa  152  5.9999999999999996e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2543  substrate-binding region of ABC-type glycine betaine transport system  31.61 
 
 		 342 aa  152  7e-36  Chelativorans sp. BNC1  Bacteria  normal  0.221502  n/a   
 
 
-
 
NC_008346  Swol_1738  ABC transporter substrate-binding protein  31.33 
 
 		 340 aa  152  1e-35  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0735907  n/a   
 
 
-
 
NC_010322  PputGB1_2363  substrate-binding region of ABC-type glycine betaine transport system  28.7 
 
 		 338 aa  150  3e-35  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1600  ABC transporter, periplasmic substrate-binding protein, putative  29.53 
 
 		 337 aa  144  2e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.865849  n/a   
 
 
-
 
NC_007492  Pfl01_0362  substrate-binding region of ABC-type glycine betaine transport system  30.26 
 
 		 322 aa  142  9e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.376501  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2845  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  29.21 
 
 		 345 aa  134  1.9999999999999998e-30  Burkholderia sp. 383  Bacteria  normal  1  normal  0.894091 
 
 
-
 
NC_010718  Nther_2048  Substrate-binding region of ABC-type glycine betaine transport system  28.96 
 
 		 341 aa  121  1.9999999999999998e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0715987  decreased coverage  0.00000000000901879 
 
 
-
 
NC_009953  Sare_1628  substrate-binding region of ABC-type glycine betaine transport system  23.58 
 
 		 324 aa  75.9  0.0000000000009  Salinispora arenicola CNS-205  Bacteria  normal  0.634582  normal  1 
 
 
-
 
NC_009380  Strop_1643  substrate-binding region of ABC-type glycine betaine transport system  24.17 
 
 		 323 aa  74.3  0.000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.010471  normal  1 
 
 
-
 
NC_013595  Sros_1794  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  22.51 
 
 		 330 aa  74.3  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011370  Rleg2_6171  Substrate-binding region of ABC-type glycine betaine transport system  24.32 
 
 		 318 aa  70.5  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.367394 
 
 
-
 
NC_009953  Sare_3224  substrate-binding region of ABC-type glycine betaine transport system  22.73 
 
 		 323 aa  70.9  0.00000000003  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004311  BRA0738  glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative  26.21 
 
 		 288 aa  65.9  0.0000000008  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1134  glycine betaine ABC transporter substrate-binding protein  20 
 
 		 317 aa  65.5  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.71375 
 
 
-
 
NC_013223  Dret_0905  Substrate-binding region of ABC-type glycine betaine transport system  26.38 
 
 		 283 aa  64.7  0.000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.121649  normal  1 
 
 
-
 
NC_008751  Dvul_0958  substrate-binding region of ABC-type glycine betaine transport system  23.55 
 
 		 285 aa  62.8  0.000000007  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00282078  normal  0.248441 
 
 
-
 
NC_013947  Snas_2396  Substrate-binding region of ABC-type glycine betaine transport system  20.97 
 
 		 314 aa  61.2  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.83747  hitchhiker  0.000913379 
 
 
-
 
NC_007492  Pfl01_2780  substrate-binding region of ABC-type glycine betaine transport system  22.6 
 
 		 325 aa  56.2  0.0000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_0473  substrate-binding region of ABC-type glycine betaine transport system  23.2 
 
 		 284 aa  55.8  0.000001  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1793  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  20.97 
 
 		 308 aa  54.3  0.000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_6163  hypothetical protein  23.62 
 
 		 312 aa  53.1  0.000006  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1620  Substrate-binding region of ABC-type glycine betaine transport system  22.87 
 
 		 293 aa  53.1  0.000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  decreased coverage  0.00000000349679  hitchhiker  0.00000000178449 
 
 
-
 
NC_011769  DvMF_1043  Substrate-binding region of ABC-type glycine betaine transport system  23.15 
 
 		 287 aa  52.8  0.000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_009656  PSPA7_6174  hypothetical protein  22.61 
 
 		 312 aa  52  0.00001  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3887  substrate-binding region of ABC-type glycine betaine transport system  24.28 
 
 		 288 aa  52.4  0.00001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.326958  n/a   
 
 
-
 
NC_007963  Csal_3169  substrate-binding region of ABC-type glycine betaine transport system  25.16 
 
 		 284 aa  51.6  0.00002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_71030  hypothetical protein  23.62 
 
 		 312 aa  51.6  0.00002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_0328  choline ABC transporter, periplasmic binding protein  22.46 
 
 		 314 aa  50.4  0.00004  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008392  Bamb_5760  substrate-binding region of ABC-type glycine betaine transport system  23.89 
 
 		 293 aa  50.4  0.00004  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_2308  Substrate-binding region of ABC-type glycine betaine transport system  24.5 
 
 		 298 aa  50.4  0.00004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00541806  n/a   
 
 
-
 
NC_007519  Dde_0675  glycine/betaine/L-proline ABC transporter, periplasmic-binding protein  25 
 
 		 279 aa  49.7  0.00007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000223596  n/a   
 
 
-
 
NC_009049  Rsph17029_0853  substrate-binding region of ABC-type glycine betaine transport system  22.07 
 
 		 308 aa  49.3  0.00009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.564926  normal  1 
 
 
-
 
NC_007493  RSP_2181  ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit  22.07 
 
 		 308 aa  49.3  0.00009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6868  substrate-binding region of ABC-type glycine betaine transport system  27.19 
 
 		 293 aa  49.3  0.0001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011883  Ddes_0822  Substrate-binding region of ABC-type glycine betaine transport system  21.17 
 
 		 287 aa  48.1  0.0002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2775  glycine betaine/L-proline ABC transporter, periplasmic binding protein, putative  26.17 
 
 		 374 aa  48.5  0.0002  Pseudomonas putida KT2440  Bacteria  normal  0.475032  normal  1 
 
 
-
 
NC_007955  Mbur_0503  ABC glycine betaine/L-proline transporter, substrate-binding subunit  21.88 
 
 		 290 aa  47.8  0.0003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.123581  n/a   
 
 
-
 
NC_007492  Pfl01_5230  substrate-binding region of ABC-type glycine betaine transport system  21.95 
 
 		 314 aa  47.8  0.0003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.184676  normal  0.0260977 
 
 
-
 
NC_008709  Ping_3427  substrate-binding region of ABC-type glycine betaine transport system  23.47 
 
 		 310 aa  47  0.0005  Psychromonas ingrahamii 37  Bacteria  normal  1  hitchhiker  0.00319099 
 
 
-
 
NC_010322  PputGB1_2691  glycine betaine transporter periplasmic subunit  26.67 
 
 		 342 aa  46.6  0.0006  Pseudomonas putida GB-1  Bacteria  normal  0.208597  normal  0.538779 
 
 
-
 
NC_009784  VIBHAR_06178  glycine betaine/L-proline ABC transporter glycine betaine/L-proline-binding  25.32 
 
 		 309 aa  46.2  0.0008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_3058  glycine betaine ABC transporter, periplasmic glycine betaine-binding protein  25.3 
 
 		 325 aa  45.8  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.302341  n/a   
 
 
-
 
NC_009512  Pput_0324  substrate-binding region of ABC-type glycine betaine transport system  21.54 
 
 		 314 aa  45.4  0.001  Pseudomonas putida F1  Bacteria  normal  0.210112  normal  0.40501 
 
 
-
 
NC_002947  PP_0304  hypothetical protein  21.54 
 
 		 322 aa  45.8  0.001  Pseudomonas putida KT2440  Bacteria  normal  1  hitchhiker  0.00268504 
 
 
-
 
NC_009439  Pmen_0063  substrate-binding region of ABC-type glycine betaine transport system  22.77 
 
 		 306 aa  45.4  0.001  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1557  twin-arginine translocation pathway signal  24.22 
 
 		 313 aa  45.1  0.002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.254611  n/a   
 
 
-
 
NC_003910  CPS_4895  putative ABC transporter, substrate-binding protein  23.95 
 
 		 318 aa  45.1  0.002  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_1959  substrate-binding region of ABC-type glycine betaine transport system  23.76 
 
 		 314 aa  44.7  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  0.874851  normal  0.400976 
 
 
-
 
NC_013457  VEA_000363  L-proline glycine betaine binding ABC transporter protein proX  25.56 
 
 		 312 aa  44.3  0.003  Vibrio sp. Ex25  Bacteria  normal  0.743651  n/a   
 
 
-
 
NC_013223  Dret_1056  Substrate-binding region of ABC-type glycine betaine transport system  21.28 
 
 		 305 aa  43.9  0.004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.511062  normal  0.0333795 
 
 
-
 
NC_009051  Memar_0992  substrate-binding region of ABC-type glycine betaine transport system  21.32 
 
 		 289 aa  43.9  0.004  Methanoculleus marisnigri JR1  Archaea  normal  0.0300335  n/a   
 
 
-
 
NC_010501  PputW619_4904  choline ABC transporter, periplasmic binding protein  21.26 
 
 		 314 aa  43.5  0.005  Pseudomonas putida W619  Bacteria  normal  1  normal  0.20164 
 
 
-
 
NC_007492  Pfl01_5238  substrate-binding region of ABC-type glycine betaine transport system  22.44 
 
 		 315 aa  43.1  0.006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.848607  normal  0.0231703 
 
 
-
 
NC_008942  Mlab_1062  hypothetical protein  20.43 
 
 		 298 aa  42.7  0.008  Methanocorpusculum labreanum Z  Archaea  normal  1  normal  1 
 
 
-
 
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