| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001569 |
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| Symbol | |
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| ID | 8559882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1773660 |
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| End bp | 1774655 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646409237 |
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| Product | putative periplasmic substrate-binding protein |
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| Protein accession | YP_003288715 |
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| Protein GI | 262396862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.496991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA CACCTTCACT GCTCTCTGTT CTGCTGCTAT CAGCATTATC TACTCATGCA
AATGCGGATG AATGCGGAAA AATAACCATC GCAGACATGA ATTGGAATTC GGCCAGCTTA
ATGGCGCACA TCGACCAATT TGTCTTAAAT GAAGGCTACC AGTGCGATGC GGAATTGATC
CCTGGTGATA GCGTTCCTAC AGGCACCTCT ATGATTGAAA AGGGACAACC TGACGTTGCG
CCAGAGTTAT GGACAAACGG CATTAAAGAA GCGCTTGATA AAGGCATTGC TGATAAGCGC
TTGCGCATCG CTGGTGAGTC GCTTGTCAAT GGCGGTGAAG AAGGGTTTTG GGTTCCCGCC
TATCTGGTAA AACAGTATCC AGAGCTCGCG ACGATAGAAG GCGTCATTAA ACACGCCAAG
CTGTTTGAAC ACCCTGAGGA TGATGACAAG TTCGCCTTTT ATAGCTGCCC TGCTGGTTGG
ACATGCCAAA TCACCTCCGG TCACTTGTTT AATGCATTAG GGTTAAGTGA GCACGGCTTT
GAGATGGTTG ACCCAGGCTC TGGCGCAGCA TTAGCTGGCA CCATCGCCAA AGCCTATGAT
CGCAAAATGC CTTGGTTTGG TTACTACTGG TCACCAACAC CCGTATTGGG CAAGTATGAT
ATGGTCAAAG TGGATTTTGG TAGCGGAACG GATCTGGAAG AGTATCGCAA CTGTACCACC
CAGCCTGATT GCGCTTCACC AAAAGTAACA ATGTACCCAC CTTCTCCAGT TCGCACAGTA
ACAACTGAGG CATTTGCGAA CAAAGAACCC CAAGCATTCG CGTACTTGCA GAAACGCGGA
TTTACCAACG AGCAAATGAG TGAAATGCTG GCCTGGATGG AAGATAACTA CGCAGATGGT
GAAGAAGCGA TGTTTTACTT CTTTAATACC TACCCTGACT TATGGAAAGG TTGGGTATCT
GAAGACGTAG CGATGAAGAT CGAAAAAGCA CTCTAG
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| Protein sequence | MKTTPSLLSV LLLSALSTHA NADECGKITI ADMNWNSASL MAHIDQFVLN EGYQCDAELI
PGDSVPTGTS MIEKGQPDVA PELWTNGIKE ALDKGIADKR LRIAGESLVN GGEEGFWVPA
YLVKQYPELA TIEGVIKHAK LFEHPEDDDK FAFYSCPAGW TCQITSGHLF NALGLSEHGF
EMVDPGSGAA LAGTIAKAYD RKMPWFGYYW SPTPVLGKYD MVKVDFGSGT DLEEYRNCTT
QPDCASPKVT MYPPSPVRTV TTEAFANKEP QAFAYLQKRG FTNEQMSEML AWMEDNYADG
EEAMFYFFNT YPDLWKGWVS EDVAMKIEKA L
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