More than 300 homologs were found in PanDaTox collection
for query gene Pcryo_1086 on replicon NC_007969
Organism: Psychrobacter cryohalolentis K5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009524  PsycPRwf_1376  substrate-binding region of ABC-type glycine betaine transport system  73.01 
 
 
652 aa  918    Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.000369923 
 
 
-
 
NC_007969  Pcryo_1086  substrate-binding region of ABC-type glycine betaine transport system  100 
 
 
646 aa  1307    Psychrobacter cryohalolentis K5  Bacteria  normal  0.809733  normal  0.592465 
 
 
-
 
NC_009719  Plav_1066  substrate-binding region of ABC-type glycine betaine transport system  42.43 
 
 
633 aa  450  1e-125  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2844  ABC proline/glycine betaine transporter, inner membrane subunit  57.04 
 
 
321 aa  303  4.0000000000000003e-81  Burkholderia sp. 383  Bacteria  normal  normal  0.852577 
 
 
-
 
NC_009656  PSPA7_5829  ABC transporter permease  55.28 
 
 
283 aa  298  2e-79  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67280  ABC transporter permease  55.28 
 
 
283 aa  297  4e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2845  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  47.73 
 
 
345 aa  295  2e-78  Burkholderia sp. 383  Bacteria  normal  normal  0.894091 
 
 
-
 
NC_004578  PSPTO_5272  histidine ABC transporter, permease protein, putative  55.63 
 
 
283 aa  293  7e-78  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4830  binding-protein dependent transport system inner membrane protein  55.63 
 
 
283 aa  293  7e-78  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.865615 
 
 
-
 
NC_007492  Pfl01_0363  binding-protein dependent transport system inner membrane protein  55.63 
 
 
283 aa  293  8e-78  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3319  substrate-binding region of ABC-type glycine betaine transport system  45.45 
 
 
337 aa  285  2.0000000000000002e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4344  substrate-binding region of ABC-type glycine betaine transport system  42.64 
 
 
337 aa  270  5e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3778  substrate-binding region of ABC-type glycine betaine transport system  43.98 
 
 
337 aa  270  8e-71  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.110017 
 
 
-
 
NC_009636  Smed_2584  binding-protein-dependent transport systems inner membrane component  55.76 
 
 
285 aa  261  3e-68  Sinorhizobium medicae WSM419  Bacteria  normal  0.320123  normal  0.13296 
 
 
-
 
NC_009512  Pput_2215  binding-protein-dependent transport systems inner membrane component  54.06 
 
 
282 aa  260  6e-68  Pseudomonas putida F1  Bacteria  normal  0.636525  normal 
 
 
-
 
NC_008254  Meso_2542  binding-protein-dependent transport systems inner membrane component  49.47 
 
 
300 aa  258  2e-67  Chelativorans sp. BNC1  Bacteria  normal  0.287103  n/a   
 
 
-
 
NC_009636  Smed_2583  substrate-binding region of ABC-type glycine betaine transport system  40.97 
 
 
344 aa  258  3e-67  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.201596 
 
 
-
 
NC_002947  PP_3558  substrate-binding region of ABC-type glycine betaine transport system  41.02 
 
 
338 aa  256  8e-67  Pseudomonas putida KT2440  Bacteria  normal  0.561868  normal 
 
 
-
 
NC_010322  PputGB1_2362  binding-protein-dependent transport systems inner membrane component  53.71 
 
 
282 aa  256  9e-67  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0801  binding-protein-dependent transport systems inner membrane component  53.9 
 
 
281 aa  256  1.0000000000000001e-66  Serratia proteamaculans 568  Bacteria  normal  0.730123  normal  0.990887 
 
 
-
 
NC_010322  PputGB1_2363  substrate-binding region of ABC-type glycine betaine transport system  40.57 
 
 
338 aa  254  4.0000000000000004e-66  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2216  substrate-binding region of ABC-type glycine betaine transport system  40.72 
 
 
338 aa  253  6e-66  Pseudomonas putida F1  Bacteria  normal  0.228946  normal 
 
 
-
 
NC_009656  PSPA7_5836  hypothetical protein  39.3 
 
 
356 aa  252  1e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67400  putative ABC transporter, periplasmic substrate-binding protein  39.23 
 
 
340 aa  252  1e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3559  binding-protein-dependent transport systems inner membrane component  61.5 
 
 
299 aa  249  1e-64  Pseudomonas putida KT2440  Bacteria  normal  0.873064  normal 
 
 
-
 
NC_004578  PSPTO_1600  ABC transporter, periplasmic substrate-binding protein, putative  42.86 
 
 
337 aa  248  3e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.865849  n/a   
 
 
-
 
NC_009439  Pmen_0486  binding-protein-dependent transport systems inner membrane component  48.18 
 
 
294 aa  244  5e-63  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2047  binding-protein-dependent transport systems inner membrane component  50.83 
 
 
282 aa  242  2e-62  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000739779  decreased coverage  0.0000000000305889 
 
 
-
 
NC_011368  Rleg2_4909  binding-protein-dependent transport systems inner membrane component  45.36 
 
 
295 aa  241  2.9999999999999997e-62  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.206817  normal 
 
 
-
 
NC_012848  Rleg_4821  binding-protein-dependent transport systems inner membrane component  43.73 
 
 
295 aa  240  5.999999999999999e-62  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02042  transmembrane ABC transporter protein  49.6 
 
 
298 aa  239  1e-61  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0739  glycine betaine/L-proline ABC transporter, permease protein, putative  51.59 
 
 
301 aa  239  2e-61  Brucella suis 1330  Bacteria  normal  0.483672  n/a   
 
 
-
 
NC_009668  Oant_3888  binding-protein-dependent transport systems inner membrane component  52.21 
 
 
301 aa  238  2e-61  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0691  putative glycine betaine/L-proline ABC transporter, permease protein  51.59 
 
 
299 aa  238  2e-61  Brucella ovis ATCC 25840  Bacteria  normal  0.18849  n/a   
 
 
-
 
NC_007650  BTH_II0967  glycine betaine/L-proline ABC transporter, permease protein, putative  51.2 
 
 
300 aa  238  4e-61  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6869  binding-protein-dependent transport systems inner membrane component  51.71 
 
 
294 aa  236  9e-61  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009079  BMA10247_A1869  glycine betaine/L-proline ABC transporter, permease protein  51.2 
 
 
300 aa  236  9e-61  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1932  glycine betaine/L-proline ABC transporter, permease protein  51.2 
 
 
300 aa  236  9e-61  Burkholderia pseudomallei 1106a  Bacteria  normal  0.738925  n/a   
 
 
-
 
NC_008835  BMA10229_0902  glycine betaine/L-proline ABC transporter, permease protein  51.2 
 
 
300 aa  236  9e-61  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0565  putative glycine betaine/L-proline ABC transporter, permease protein  51.2 
 
 
300 aa  236  9e-61  Burkholderia mallei ATCC 23344  Bacteria  normal  0.120464  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0449  glycine betaine/L-proline ABC transporter, permease protein  51.2 
 
 
300 aa  236  9e-61  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2026  glycine betaine/L-proline ABC transporter, permease protein  51.2 
 
 
300 aa  236  9e-61  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0802  substrate-binding region of ABC-type glycine betaine transport system  36.31 
 
 
321 aa  236  1.0000000000000001e-60  Serratia proteamaculans 568  Bacteria  normal  0.0332812  normal 
 
 
-
 
NC_009784  VIBHAR_06563  glycine betaine/L-proline ABC transporter permease protein  45.99 
 
 
299 aa  236  1.0000000000000001e-60  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_1736  binding-protein-dependent transport systems inner membrane component  52.52 
 
 
283 aa  236  1.0000000000000001e-60  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.000000490097  n/a   
 
 
-
 
NC_008786  Veis_4060  binding-protein-dependent transport systems inner membrane component  50.61 
 
 
290 aa  235  2.0000000000000002e-60  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0808444  normal  0.400177 
 
 
-
 
NC_007005  Psyr_4829  substrate-binding region of ABC-type glycine betaine transport system  37.91 
 
 
322 aa  234  4.0000000000000004e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.93299 
 
 
-
 
NC_004578  PSPTO_5271  histidine transporter, periplasmic histidine-binding protein  37.91 
 
 
322 aa  233  7.000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5091  choline ABC transporter, permease protein  50.4 
 
 
298 aa  233  8.000000000000001e-60  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.674099 
 
 
-
 
NC_008391  Bamb_4566  binding-protein-dependent transport systems inner membrane component  50.4 
 
 
298 aa  233  8.000000000000001e-60  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.669781 
 
 
-
 
NC_013457  VEA_000686  L-proline Glycine Betaine ABC transport system permease protein proW  45.26 
 
 
299 aa  233  9e-60  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4810  binding-protein dependent transport system inner membrane protein  49.2 
 
 
298 aa  233  1e-59  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3449  choline ABC transporter, permease protein  50 
 
 
301 aa  232  2e-59  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0946  binding-protein-dependent transport systems inner membrane component  48.04 
 
 
296 aa  231  2e-59  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00558212  normal 
 
 
-
 
NC_008686  Pden_1194  binding-protein-dependent transport systems inner membrane component  48.04 
 
 
296 aa  231  2e-59  Paracoccus denitrificans PD1222  Bacteria  normal  0.987878  normal 
 
 
-
 
NC_010086  Bmul_3486  choline ABC transporter, permease protein  50.4 
 
 
298 aa  231  3e-59  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.180465 
 
 
-
 
NC_010515  Bcenmc03_5108  choline ABC transporter, permease protein  50.4 
 
 
298 aa  231  3e-59  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0456  ABC glycine betaine/L-proline transporter, inner membrane subunit  50 
 
 
298 aa  231  3e-59  Burkholderia sp. 383  Bacteria  normal  0.424903  normal  0.0286043 
 
 
-
 
NC_008061  Bcen_3196  binding-protein-dependent transport systems inner membrane component  50.4 
 
 
298 aa  231  3e-59  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5171  binding-protein-dependent transport systems inner membrane component  50.4 
 
 
298 aa  231  3e-59  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00870989  normal  0.647601 
 
 
-
 
NC_009901  Spea_0256  binding-protein-dependent transport systems inner membrane component  45.94 
 
 
299 aa  230  5e-59  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_5761  binding-protein-dependent transport systems inner membrane component  54.5 
 
 
295 aa  230  6e-59  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3857  binding-protein-dependent transport systems inner membrane component  48.42 
 
 
293 aa  230  7e-59  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.215076 
 
 
-
 
NC_008463  PA14_67300  putative binding protein component of ABC transporter  36.89 
 
 
322 aa  229  1e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_1541  ABC-type proline/glycine betaine transport system, permease component  51.42 
 
 
573 aa  228  2e-58  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.11623  n/a   
 
 
-
 
NC_013946  Mrub_1284  binding-protein-dependent transport systems inner membrane component  50 
 
 
279 aa  228  3e-58  Meiothermus ruber DSM 1279  Bacteria  normal  0.437993  normal  0.22836 
 
 
-
 
NC_007492  Pfl01_0362  substrate-binding region of ABC-type glycine betaine transport system  37.31 
 
 
322 aa  228  3e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.376501  normal 
 
 
-
 
NC_009831  Ssed_4236  putative permease  44.04 
 
 
299 aa  227  5.0000000000000005e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.886971  unclonable  0.0000000000487453 
 
 
-
 
NC_007355  Mbar_A2377  glycine betaine/L-proline ABC transporter, permease  50.6 
 
 
274 aa  226  9e-58  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.336492 
 
 
-
 
NC_008751  Dvul_0957  binding-protein-dependent transport systems inner membrane component  49.6 
 
 
283 aa  225  2e-57  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000687252  normal  0.263014 
 
 
-
 
NC_008782  Ajs_1064  binding-protein-dependent transport systems inner membrane component  46.69 
 
 
400 aa  224  4e-57  Acidovorax sp. JS42  Bacteria  normal  0.0842907  normal 
 
 
-
 
NC_010506  Swoo_1846  binding-protein-dependent transport systems inner membrane component  43.62 
 
 
298 aa  224  4.9999999999999996e-57  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00873954  hitchhiker  0.00370513 
 
 
-
 
NC_011992  Dtpsy_0980  binding-protein-dependent transport systems inner membrane component  46.95 
 
 
400 aa  223  6e-57  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5830  ABC transporter periplasmic binding protein  36.89 
 
 
322 aa  223  7e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5041  choline ABC transporter, permease protein  48.81 
 
 
300 aa  223  9e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.503755 
 
 
-
 
NC_004116  SAG1796  amino acid ABC transporter, permease protein  42.01 
 
 
575 aa  221  1.9999999999999999e-56  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.135141  n/a   
 
 
-
 
NC_007494  RSP_3058  ABC proline/glycine betaine transporter, inner membrane subunit  44.84 
 
 
303 aa  221  3e-56  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3786  binding-protein-dependent transport systems inner membrane component  44.84 
 
 
303 aa  221  3e-56  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.343272 
 
 
-
 
NC_012791  Vapar_2520  binding-protein-dependent transport systems inner membrane component  43.56 
 
 
383 aa  221  3e-56  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0651  binding-protein-dependent transport systems inner membrane component  45.39 
 
 
295 aa  221  3e-56  Sinorhizobium medicae WSM419  Bacteria  normal  0.938686  normal  0.21928 
 
 
-
 
NC_008254  Meso_2543  substrate-binding region of ABC-type glycine betaine transport system  38.31 
 
 
342 aa  221  3.9999999999999997e-56  Chelativorans sp. BNC1  Bacteria  normal  0.221502  n/a   
 
 
-
 
NC_008340  Mlg_0733  binding-protein-dependent transport systems inner membrane component  51.49 
 
 
282 aa  221  5e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1615  ABC proline/glycine betaine transporter, inner membrane subunit  48.41 
 
 
300 aa  220  6e-56  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_3320  binding-protein-dependent transport systems inner membrane component  49.38 
 
 
278 aa  220  6e-56  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.177643  n/a   
 
 
-
 
NC_009253  Dred_3208  binding-protein-dependent transport systems inner membrane component  44.6 
 
 
278 aa  219  1e-55  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0667053  n/a   
 
 
-
 
NC_008312  Tery_4110  substrate-binding region of ABC-type glycine betaine transport system  43.99 
 
 
662 aa  217  5e-55  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.580114 
 
 
-
 
NC_008752  Aave_1496  binding-protein-dependent transport systems inner membrane component  44.13 
 
 
451 aa  217  5.9999999999999996e-55  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0787924  normal  0.370511 
 
 
-
 
NC_007963  Csal_1902  binding-protein-dependent transport systems inner membrane component  44.98 
 
 
276 aa  217  5.9999999999999996e-55  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00849188  n/a   
 
 
-
 
NC_007643  Rru_A2476  binding-protein dependent transport system inner membrane protein  47.69 
 
 
357 aa  216  8e-55  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0502  ABC glycine betaine/L-proline transporter, inner membrane subunit  48.79 
 
 
276 aa  216  8e-55  Methanococcoides burtonii DSM 6242  Archaea  normal  0.819479  n/a   
 
 
-
 
NC_011989  Avi_2574  ABC transporter membrane spanning protein  45.68 
 
 
304 aa  216  9.999999999999999e-55  Agrobacterium vitis S4  Bacteria  normal  0.127143  n/a   
 
 
-
 
NC_010322  PputGB1_2692  binding-protein-dependent transport systems inner membrane component  45.58 
 
 
317 aa  216  9.999999999999999e-55  Pseudomonas putida GB-1  Bacteria  normal  0.565238  normal  0.807022 
 
 
-
 
NC_011769  DvMF_1044  binding-protein-dependent transport systems inner membrane component  47.29 
 
 
280 aa  215  2.9999999999999995e-54  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012917  PC1_3321  glycine betaine transporter membrane protein  42.46 
 
 
422 aa  215  2.9999999999999995e-54  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0864  glycine betaine transporter membrane protein  44.62 
 
 
400 aa  214  2.9999999999999995e-54  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3477  glycine betaine transporter membrane protein  42.81 
 
 
400 aa  214  2.9999999999999995e-54  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0896  glycine betaine transporter membrane protein  46.4 
 
 
392 aa  214  2.9999999999999995e-54  Dickeya dadantii Ech703  Bacteria  normal  0.652731  n/a   
 
 
-
 
NC_009832  Spro_3734  glycine betaine transporter membrane protein  39.51 
 
 
374 aa  214  3.9999999999999995e-54  Serratia proteamaculans 568  Bacteria  normal  normal  0.346583 
 
 
-
 
NC_009436  Ent638_3158  glycine betaine transporter membrane protein  45.05 
 
 
355 aa  214  4.9999999999999996e-54  Enterobacter sp. 638  Bacteria  normal  0.363018  normal 
 
 
-
 
NC_013456  VEA_003610  L-proline Glycine Betaine ABC transport system permease protein proW  46.27 
 
 
363 aa  214  4.9999999999999996e-54  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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