| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0650 |
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| Symbol | |
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| ID | 5321486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 702769 |
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| End bp | 703767 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789586 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001326341 |
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| Protein GI | 150395874 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.324621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTCTTGCAAC GACATGCCTG GCCGCTGGTC TTCTTGGACT GGGCAGTACG
GCATCGGCGG CGGAATGCGG CGATGTGACC ATTGCCAACA TGAACTGGCA GAGCGCTGAA
GTCCTGGCGA GTGTGGACAA GTTCATTCTG ACCGAGGGTT ACGGCTGCAA TGCCGATCTC
GTCGTGGGCG ATACGGTGCC GACCATCACC TCGATGATCG AAAAGGGCGA GCCGGACATT
GCGCCGGAAG GCTGGGTCGA TCTGCTGCCC GACGTCGTGA ACCGTGGTCT CGAGGAAGGC
AAGCTTGTAG GCGCCGCAGT GGCGCTTTCA GACGGCGCCG TCCAGGGTTG GTGGGTGCCG
AAATATATCG TCGACGCCAA TCCGGACATC AAGACGATCG ACGACGTCCT GAAGCACAAG
GACCTCTTCC CGGATCCCGA AGATCCAAGC AAGGGCGCGA TTTTCAACGG CCCGCAGGGC
TGGGGCGGCA CGGTCGTTAC GACGCAGCTC TATAAGGCTT ACGGCGCCGA GCAGGCGGGC
TTCACGTTAG TCGATACCGG CTCGGCAGCC GGCCTCGACG GATCGATTGC CAAGGCGTAT
GAGCGCAAGC AGGGCTGGGT CGGCTACTAC TGGGCTCCGA CGGCGCTGCT AGGCAAGTAC
GAGATGGTCA AGCTCGGCCA TGGCGTTCCG AACGACATGG CGGAATGGAA GCGTTGCAAT
ACGGTTGCGG ACTGCCCGGA CCCGAAGAAG AACGATTGGC CGAAGGACAA GGTCCAGACG
CTGGTGACCA AGGAATTTGC CGATCGTGCT GGTCCGGCCA TGGAGTACCT CAATACGCGC
GCCTGGACGA ACGACACGGT GAACAAGCTG ATGGCCTGGA TGACCGACAA TCAGGCGAGC
GGCGAGGAAG GTGCGAAGCA CTTCCTCGAG GAGAACCCGG ACCTCTGGAC CAAGTGGGTC
TCTCCCGAAG TCGCCGAGAA GATCAAGTCG GCCCTTTAG
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| Protein sequence | MKKLLATTCL AAGLLGLGST ASAAECGDVT IANMNWQSAE VLASVDKFIL TEGYGCNADL
VVGDTVPTIT SMIEKGEPDI APEGWVDLLP DVVNRGLEEG KLVGAAVALS DGAVQGWWVP
KYIVDANPDI KTIDDVLKHK DLFPDPEDPS KGAIFNGPQG WGGTVVTTQL YKAYGAEQAG
FTLVDTGSAA GLDGSIAKAY ERKQGWVGYY WAPTALLGKY EMVKLGHGVP NDMAEWKRCN
TVADCPDPKK NDWPKDKVQT LVTKEFADRA GPAMEYLNTR AWTNDTVNKL MAWMTDNQAS
GEEGAKHFLE ENPDLWTKWV SPEVAEKIKS AL
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