| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3778 |
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| Symbol | |
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| ID | 3369313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4496436 |
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| End bp | 4497449 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654136 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_236847 |
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| Protein GI | 66047006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.110017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA TAACACGACT CCTGGGCTGT TCACTTCTGG CGCTGGGCCT GCTTGGCCAG
ACAGCCACAG CGGCTGAAAA AGCCAAGCCT ATCCAGTTTG GCGCACTGAC TTGGGAAAGC
GGCAGCCTGA TCACTGAAGT CCTGCGTACC ATTGTCGAGA AGGGCTATGG CTACCCGACC
GATACCTTGC CCGGCAGTAC GGTCAGCCTG GAAACCGCGC TGGCGAAAAA TGACATTCAG
GTGATCGCCG AAGAATGGAC CGGACGCAGC CCGGTGTGGG TCAAGGCTGA AGAGGAGGGC
AAGGTGCTCG GGCTGGGCAA CATCGTCAAG GGCGCCACCG AAGGCTGGTG GGTGCCCGAG
TACGTAATCA AGGGCGATGC CGCCAAAGGC ATCAAGCCGC TGGCGCCTGA CCTGAAATCT
GTCGCGGATC TGGCGCGTTA CAAGGACGTT TTTAAAGACC CTGAATCGCC CGACAAAGGC
CGGTTCCTGA ACAGCCCGAG CGGCTGGACC TCGGAAATCG TCAACACGCA GAAACTCAAG
GCTTATGGCC TGGCCGACAG TTTCGTCAAC TTCCGTACCG GCTCGGGCGC AGCACTGGAC
GCCGAGGTCG CCTCCGCTAT CCGGCGCGGC AAGCCTGTGT TGTTTTACTA CTGGTCCCCT
ACGCCCCTGC TGGGCAAGTA CAAGCTGATC AAACTGGACG AGCCCGCCTT TGATGCCGAG
GCCTGGAAAA CCCTGACTGA CGCCAGCAAC CCCAACCCAC GCGGCACGTC TTCGCTGGCG
GCGACGCTGT CGATTGGCGT ATCGGCAGAA TTCAGCAAGC AGTACCCCGA ACTGGTGAGT
GTCTTCAAAG GCGTGGATTT CCCGATTGAT CTGCTGAACA AGACCTTGGG CGAAATGAGT
GACAAGCATG AGGATGCCAA GGTCGTGGCT GCCCGCTTTC TCAAGCAGCA TCCCGAGGTC
TGGAAAGCCT GGTTACCTGC CGATGTTGCC ACCCGGGTCA GCGGCAGTCT TTAA
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| Protein sequence | MKSITRLLGC SLLALGLLGQ TATAAEKAKP IQFGALTWES GSLITEVLRT IVEKGYGYPT
DTLPGSTVSL ETALAKNDIQ VIAEEWTGRS PVWVKAEEEG KVLGLGNIVK GATEGWWVPE
YVIKGDAAKG IKPLAPDLKS VADLARYKDV FKDPESPDKG RFLNSPSGWT SEIVNTQKLK
AYGLADSFVN FRTGSGAALD AEVASAIRRG KPVLFYYWSP TPLLGKYKLI KLDEPAFDAE
AWKTLTDASN PNPRGTSSLA ATLSIGVSAE FSKQYPELVS VFKGVDFPID LLNKTLGEMS
DKHEDAKVVA ARFLKQHPEV WKAWLPADVA TRVSGSL
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