55 homologs were found in PanDaTox collection
for query gene Rleg_2382 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012850  Rleg_2382  Substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 331 aa  681    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0539771  hitchhiker  0.00933627 
 
 
-
 
NC_011369  Rleg2_2138  Substrate-binding region of ABC-type glycine betaine transport system  93.96 
 
 		 331 aa  645    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0458223  normal  0.188194 
 
 
-
 
NC_009636  Smed_1767  substrate-binding region of ABC-type glycine betaine transport system  65.16 
 
 		 332 aa  442  1e-123  Sinorhizobium medicae WSM419  Bacteria  normal  0.473646  normal  0.0264882 
 
 
-
 
NC_011989  Avi_2573  ABC transporter substrate binding protein  59.04 
 
 		 332 aa  432  1e-120  Agrobacterium vitis S4  Bacteria  normal  0.0219871  n/a   
 
 
-
 
NC_009050  Rsph17029_3787  substrate-binding region of ABC-type glycine betaine transport system  61.95 
 
 		 333 aa  407  1e-113  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.347149 
 
 
-
 
NC_007494  RSP_3059  ABC proline/glycine betaine transporter, periplasmic substrate-binding protein  61.95 
 
 		 333 aa  408  1e-113  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.78778  n/a   
 
 
-
 
NC_009428  Rsph17025_2828  substrate-binding region of ABC-type glycine betaine transport system  60.47 
 
 		 333 aa  396  1e-109  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.23634 
 
 
-
 
NC_008687  Pden_3856  substrate-binding region of ABC-type glycine betaine transport system  52.41 
 
 		 331 aa  363  2e-99  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.215076 
 
 
-
 
NC_009636  Smed_0650  substrate-binding region of ABC-type glycine betaine transport system  49.7 
 
 		 332 aa  353  2e-96  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.324621 
 
 
-
 
NC_012848  Rleg_4822  Substrate-binding region of ABC-type glycine betaine transport system  50.8 
 
 		 333 aa  346  4e-94  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_4910  Substrate-binding region of ABC-type glycine betaine transport system  50.16 
 
 		 333 aa  339  2.9999999999999998e-92  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_4889  substrate-binding region of ABC-type glycine betaine transport system  49.2 
 
 		 333 aa  331  8e-90  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.64177 
 
 
-
 
NC_008686  Pden_0945  substrate-binding region of ABC-type glycine betaine transport system  45.32 
 
 		 333 aa  330  3e-89  Paracoccus denitrificans PD1222  Bacteria  normal  0.249192  normal  1 
 
 
-
 
NC_008686  Pden_1195  substrate-binding region of ABC-type glycine betaine transport system  45.32 
 
 		 333 aa  330  3e-89  Paracoccus denitrificans PD1222  Bacteria  normal  0.353421  normal  1 
 
 
-
 
NC_011369  Rleg2_2919  Substrate-binding region of ABC-type glycine betaine transport system  46.55 
 
 		 333 aa  319  3.9999999999999996e-86  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0603439  normal  1 
 
 
-
 
NC_009784  VIBHAR_06562  hypothetical protein  44.07 
 
 		 330 aa  315  7e-85  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1845  substrate-binding region of ABC-type glycine betaine transport system  42.3 
 
 		 334 aa  305  7e-82  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00000186809  normal  0.0102549 
 
 
-
 
NC_009901  Spea_0257  substrate-binding region of ABC-type glycine betaine transport system  43.97 
 
 		 334 aa  299  5e-80  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4235  ABC transporter substrate-binding protein  42.99 
 
 		 334 aa  289  4e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  0.663539  hitchhiker  0.000000168008 
 
 
-
 
NC_013457  VEA_001569  putative periplasmic substrate-binding protein  40.71 
 
 		 331 aa  287  2e-76  Vibrio sp. Ex25  Bacteria  normal  0.496991  n/a   
 
 
-
 
NC_003910  CPS_4933  amino acid ABC transporter, periplasmic amino acid-binding protein  35.54 
 
 		 323 aa  233  3e-60  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1285  Substrate-binding region of ABC-type glycine betaine transport system  30.89 
 
 		 334 aa  160  4e-38  Meiothermus ruber DSM 1279  Bacteria  normal  0.435568  normal  0.230718 
 
 
-
 
NC_007969  Pcryo_1086  substrate-binding region of ABC-type glycine betaine transport system  28.62 
 
 		 646 aa  147  2.0000000000000003e-34  Psychrobacter cryohalolentis K5  Bacteria  normal  0.809733  normal  0.592465 
 
 
-
 
NC_009524  PsycPRwf_1376  substrate-binding region of ABC-type glycine betaine transport system  29.01 
 
 		 652 aa  140  3e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  1  hitchhiker  0.000369923 
 
 
-
 
NC_007005  Psyr_4829  substrate-binding region of ABC-type glycine betaine transport system  28.48 
 
 		 322 aa  132  6e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.93299 
 
 
-
 
NC_009719  Plav_1066  substrate-binding region of ABC-type glycine betaine transport system  27.8 
 
 		 633 aa  132  9e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_1738  ABC transporter substrate-binding protein  29.17 
 
 		 340 aa  132  1.0000000000000001e-29  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0735907  n/a   
 
 
-
 
NC_004578  PSPTO_5271  histidine transporter, periplasmic histidine-binding protein  28.16 
 
 		 322 aa  130  3e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_67400  putative ABC transporter, periplasmic substrate-binding protein  28.12 
 
 		 340 aa  130  3e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_5836  hypothetical protein  27.71 
 
 		 356 aa  129  6e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_0802  substrate-binding region of ABC-type glycine betaine transport system  28.28 
 
 		 321 aa  129  6e-29  Serratia proteamaculans 568  Bacteria  normal  0.0332812  normal  1 
 
 
-
 
NC_008254  Meso_2543  substrate-binding region of ABC-type glycine betaine transport system  28.16 
 
 		 342 aa  127  4.0000000000000003e-28  Chelativorans sp. BNC1  Bacteria  normal  0.221502  n/a   
 
 
-
 
NC_007492  Pfl01_4344  substrate-binding region of ABC-type glycine betaine transport system  27.57 
 
 		 337 aa  125  8.000000000000001e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2845  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  28.08 
 
 		 345 aa  124  2e-27  Burkholderia sp. 383  Bacteria  normal  1  normal  0.894091 
 
 
-
 
NC_009656  PSPA7_5830  ABC transporter periplasmic binding protein  26.18 
 
 		 322 aa  123  4e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_2216  substrate-binding region of ABC-type glycine betaine transport system  25.85 
 
 		 338 aa  122  6e-27  Pseudomonas putida F1  Bacteria  normal  0.228946  normal  1 
 
 
-
 
NC_008463  PA14_67300  putative binding protein component of ABC transporter  25.32 
 
 		 322 aa  122  9.999999999999999e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_2363  substrate-binding region of ABC-type glycine betaine transport system  25.99 
 
 		 338 aa  120  4.9999999999999996e-26  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_3319  substrate-binding region of ABC-type glycine betaine transport system  25.91 
 
 		 337 aa  119  7e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2583  substrate-binding region of ABC-type glycine betaine transport system  29.01 
 
 		 344 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.201596 
 
 
-
 
NC_002947  PP_3558  substrate-binding region of ABC-type glycine betaine transport system  25.08 
 
 		 338 aa  116  5e-25  Pseudomonas putida KT2440  Bacteria  normal  0.561868  normal  1 
 
 
-
 
NC_010718  Nther_2048  Substrate-binding region of ABC-type glycine betaine transport system  28.09 
 
 		 341 aa  114  2.0000000000000002e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0715987  decreased coverage  0.00000000000901879 
 
 
-
 
NC_007005  Psyr_3778  substrate-binding region of ABC-type glycine betaine transport system  26.56 
 
 		 337 aa  112  8.000000000000001e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.110017 
 
 
-
 
NC_007492  Pfl01_0362  substrate-binding region of ABC-type glycine betaine transport system  23.53 
 
 		 322 aa  107  2e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.376501  normal  1 
 
 
-
 
NC_004578  PSPTO_1600  ABC transporter, periplasmic substrate-binding protein, putative  26.23 
 
 		 337 aa  99.8  5e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.865849  n/a   
 
 
-
 
NC_009380  Strop_1643  substrate-binding region of ABC-type glycine betaine transport system  26.13 
 
 		 323 aa  73.6  0.000000000005  Salinispora tropica CNB-440  Bacteria  normal  0.010471  normal  1 
 
 
-
 
NC_009953  Sare_1628  substrate-binding region of ABC-type glycine betaine transport system  24.92 
 
 		 324 aa  64.3  0.000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.634582  normal  1 
 
 
-
 
NC_014165  Tbis_1134  glycine betaine ABC transporter substrate-binding protein  21.21 
 
 		 317 aa  62.8  0.000000008  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.71375 
 
 
-
 
NC_009953  Sare_3224  substrate-binding region of ABC-type glycine betaine transport system  20.13 
 
 		 323 aa  62.4  0.00000001  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1793  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  23.1 
 
 		 308 aa  59.7  0.00000006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1794  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  22.48 
 
 		 330 aa  58.2  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011370  Rleg2_6171  Substrate-binding region of ABC-type glycine betaine transport system  22.56 
 
 		 318 aa  57.8  0.0000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.367394 
 
 
-
 
NC_013947  Snas_2396  Substrate-binding region of ABC-type glycine betaine transport system  20.31 
 
 		 314 aa  52  0.00001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.83747  hitchhiker  0.000913379 
 
 
-
 
NC_009439  Pmen_0063  substrate-binding region of ABC-type glycine betaine transport system  23.55 
 
 		 306 aa  43.9  0.004  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_3427  substrate-binding region of ABC-type glycine betaine transport system  22.63 
 
 		 310 aa  42.7  0.009  Psychromonas ingrahamii 37  Bacteria  normal  1  hitchhiker  0.00319099 
 
 
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