Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1195 |
Symbol | |
ID | 4580078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1167437 |
End bp | 1168438 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768511 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_914996 |
Protein GI | 119383940 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.353421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAT CCTATCTTCT CGGCACCGCC TTCGCGCTGC CCTTCCTGGC GCTGGCCGGC CCCGCCTCGG CCGATTGCGG CAGCCTGACC ATCGCCAGCA TGAACTGGCA GAGCGCCGAG CTTGCCGCGG CGCTGGACGC CTTCGTGCTG GGCAACGGCT ATGGCTGCAC CGTCGAGGTG ATCCAGGGCG ACACGGTGCC GACGCTGACC TCGATGGTGG AGAAGGGCCA GCCCGAGGTG GCGCCGGAAG GCTGGGTCGA CCTGGTGCCG GAGGTCATCC AGTCGGGGCT GGCCGAGGAC CGGATCGTCG TGGCCGGCGA CATCCTGACC GACGGCGCCG TCCAGGGCTG GTGGATCCCG AAATACCTGG CCGACGCCAA TCCCGAGCTG AAGACCATCG ACGACGTGCT GGCACGGCCC GACCTGTTCC CCGATCCCGA GGATGCCTCG AAGGGCGCCA TCTTCAACGG CCCGGCGGGC TGGGGCGGCA CGGTGATCAC CAGCCAGCTC TACAAGGCCT TCGGCGCCGA GGCGGCGGGG TTCAACCTGG TCGACACCGG CTCGGCCGCC GGGCTGGACG GCTCGATCGC GCGCGCCTAC GAGCGCCAGC AGGGCTGGGT CGGCTATTAC TGGGCGCCGA CCGCGCTTCT GGGCCGCTAC GAGATGGTCC GGCTGGAGCA CGGCGTGGCG CTGGACATGG ACGAGTGGCA GAACTGCACC TCGAATGCCG ATTGCGCCGA GCCGAAGAAG AACGACTGGC CCACCGACAA GGTGCAGACC GTCGTTGCCA AGGGCTTTGC CGACGCCGCC CCGCCCGAGG TGATGGACTA CCTGTCCAGG CGCTCCTGGT CGAACGACAC CGTGAACGCG CTGATGGCCT GGATGACCGA CAACCAGGCC CAGGGCGAGG ACGGCGCCAA GGAGTTCCTG CGGGGCAACG AGGCGACCTG GACCGAATGG GTCACGCCCG AGGCCGCCGA GAAGATCAAG GCGGCGCTCT GA
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Protein sequence | MKRSYLLGTA FALPFLALAG PASADCGSLT IASMNWQSAE LAAALDAFVL GNGYGCTVEV IQGDTVPTLT SMVEKGQPEV APEGWVDLVP EVIQSGLAED RIVVAGDILT DGAVQGWWIP KYLADANPEL KTIDDVLARP DLFPDPEDAS KGAIFNGPAG WGGTVITSQL YKAFGAEAAG FNLVDTGSAA GLDGSIARAY ERQQGWVGYY WAPTALLGRY EMVRLEHGVA LDMDEWQNCT SNADCAEPKK NDWPTDKVQT VVAKGFADAA PPEVMDYLSR RSWSNDTVNA LMAWMTDNQA QGEDGAKEFL RGNEATWTEW VTPEAAEKIK AAL
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