| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1767 |
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| Symbol | |
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| ID | 5322625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1851013 |
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| End bp | 1852011 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790705 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001327437 |
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| Protein GI | 150396970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.473646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0264882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TCCTTGCTCC CCTCCTACTC GCTGCGGGCA TATGCCTTAT GGCGGGTTCC
TCAGGAGCTG ACGAATGCGG AAACGTCACT ATTGCCGAGA TGGACTGGGC CTCGGCTGGC
GTTGCGGCTC GCGTGGACAG GCTCATCCTT GAAAACGGCT ATGGATGCAG CGTCAAGCTG
GTCCCCGGCG ACACTATGCC GACATTCTCT TCGATGAACG ATAAGGCAGA GCCCGACCTG
GTCCCGGAAC TCTGGATCAA CTCCGTGCGG ACGCCTTTCG ACGCCGCAGT CAAGGAGGGT
CGCCTCGTCG AAGGCGCCAG GGTCTTGAGC GAAGGCGGGG TAGAAGGCTG GTGGATTCCA
AAGTTCATCG CCGACGCACA CCCGAAGATC CGAACGGTGC AGGACGCTTT GAAGCACCCG
GAACTCTTTC CCTCACCCGA CGACCCCGCA AAGGGGGCAG TCCATAATTG CCCATCGAGC
TGGAACTGCC GGTTCTCCAC CGCCAACCTC TACAAGGCAC TCGAAGGGGA TAAGGCCGGC
TTCCAGCTTG TCGACCCAGG CTCGGCCGCC GGCCTCGACG GTTCTATCGC CGAAGCATTC
GAGAAGAAGA CCGGCTGGCT CGGCTATTAT TGGGCCCCCA CCGCAGTGCT CGGTAAATAC
GAGATGACGT TGTTGTCCTT CGGCGTCGAT CACGACAAGG CGGAGTGGGA CTCCTGCACC
GCCGTTCCGG ACTGCCCCGC CCCGAAGGTA AACTCCTATC CGGTCTCCGA TGTCTACACT
GTGGTGACCG GGTCCTTTGC CGACAGAGCA GGTAGCGCCA TGAATTATGT CGGGGCGCGG
CAATGGGAGA ACGCGACGAT CAACAAGGTT CTGGCCTGGA TGGATCAGAA CCAGGCCACG
AACGAAGACG CGGCCCGCTA CTTCCTCGGA AACTTTCAAG AGATATGGAC GCAGTGGGTG
AGTCCGGAAG TCGCCGAAAA AGTGAAGGCG GCGCTCTGA
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| Protein sequence | MKKLLAPLLL AAGICLMAGS SGADECGNVT IAEMDWASAG VAARVDRLIL ENGYGCSVKL
VPGDTMPTFS SMNDKAEPDL VPELWINSVR TPFDAAVKEG RLVEGARVLS EGGVEGWWIP
KFIADAHPKI RTVQDALKHP ELFPSPDDPA KGAVHNCPSS WNCRFSTANL YKALEGDKAG
FQLVDPGSAA GLDGSIAEAF EKKTGWLGYY WAPTAVLGKY EMTLLSFGVD HDKAEWDSCT
AVPDCPAPKV NSYPVSDVYT VVTGSFADRA GSAMNYVGAR QWENATINKV LAWMDQNQAT
NEDAARYFLG NFQEIWTQWV SPEVAEKVKA AL
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