| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3856 |
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| Symbol | |
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| ID | 4582407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 988892 |
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| End bp | 989887 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771165 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_917618 |
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| Protein GI | 119386563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.215076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAT TTCTTGCTTC GACTACGCTT GCCTTCATGG CACTGGCCGT CCCCGCATTC
GCCGCTGACG AGGAATGCGG CAGCATCACC GTGGCAGAGA TGAACTGGGC CTCGGCGGGG
CTGGCGGCGT GGGTCGACAA GATCATCCTC GAAGAGGGCT ATGGCTGCGA CGTGGCGCTG
GTCTCGGGCG ATACGATGCC GACTTTCGCG TCGATGAACG AAAAGGCCCA GCCGGACATG
GCCCCCGAGT TGTGGGTCAA CGCGGTCAAG GAGCCGCTGG ACCAGGCGGT CGCGGAAGGG
CGGATCGTGA TCGCCTCGCA GATCCTGTCC GATGGCGGGG TCGAGGGCAT CTGGGTGCCG
ACATGGCTGG CCGAAGAGCA CAACATCCAC ACGCTCAAGG ACGCGCTGGA ACATCCAGAA
CTGTTCCCCG GCGCCGAGGA CAGCAGCAAG GGCGCCTGGT TCGGCTGTCC CTCGGGCTGG
GCCTGCCAGG CGATCAACCG CAACCAGTTC GTCGGCTCGG GCGCTGCGGA CAAAGGGTTC
GAACTGGTCG ATTCCGGCTC GGCCGCCGCG CTGGACGGCT CGATCGCGCG GGCGGCGAAC
CGCAAGGAGG GCTGGCTGGG CTATTACTGG GCACCCACTG CCATCTTGGG CCAGTATGAC
ATGACCCGGC TGGAACTCGA GGCCGAATTC GACCGCGAGC GCTGGGACAA TTGCATGGTC
AAGCCCGACT GCGTCGATCC GCAGGTGACG GAATGGCCGG TCTCGGACGT CTATACCGCC
GTGACCAAGG AGTTCGCCGA CAAGGCCGGC GTGGCCATGG ATTACGTCAA GACCCGGGCC
TGGAGCAACG AGACCGTCAA CGCCATGCTG GCCTGGATGG TCAAGAACCA GGCCAGCAAC
GAGGATGCCG CCTATGAGTT CCTCGAACGG CACGAGGACA TCTGGACCGA ATGGGTTCCC
GCCGAAGTGG CCGACAAGGT CAGGGCCGCC CTTTAA
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| Protein sequence | MGKFLASTTL AFMALAVPAF AADEECGSIT VAEMNWASAG LAAWVDKIIL EEGYGCDVAL
VSGDTMPTFA SMNEKAQPDM APELWVNAVK EPLDQAVAEG RIVIASQILS DGGVEGIWVP
TWLAEEHNIH TLKDALEHPE LFPGAEDSSK GAWFGCPSGW ACQAINRNQF VGSGAADKGF
ELVDSGSAAA LDGSIARAAN RKEGWLGYYW APTAILGQYD MTRLELEAEF DRERWDNCMV
KPDCVDPQVT EWPVSDVYTA VTKEFADKAG VAMDYVKTRA WSNETVNAML AWMVKNQASN
EDAAYEFLER HEDIWTEWVP AEVADKVRAA L
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