83 homologs were found in PanDaTox collection
for query gene Spea_0257 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009901  Spea_0257  substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 334 aa  696    Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4235  ABC transporter substrate-binding protein  85.94 
 
 		 334 aa  595  1e-169  Shewanella sediminis HAW-EB3  Bacteria  normal  0.663539  hitchhiker  0.000000168008 
 
 
-
 
NC_010506  Swoo_1845  substrate-binding region of ABC-type glycine betaine transport system  81.38 
 
 		 334 aa  578  1e-164  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00000186809  normal  0.0102549 
 
 
-
 
NC_009784  VIBHAR_06562  hypothetical protein  64.94 
 
 		 330 aa  441  1e-123  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001569  putative periplasmic substrate-binding protein  61.17 
 
 		 331 aa  427  1e-118  Vibrio sp. Ex25  Bacteria  normal  0.496991  n/a   
 
 
-
 
NC_011989  Avi_2573  ABC transporter substrate binding protein  48.64 
 
 		 332 aa  341  1e-92  Agrobacterium vitis S4  Bacteria  normal  0.0219871  n/a   
 
 
-
 
NC_009636  Smed_1767  substrate-binding region of ABC-type glycine betaine transport system  49.51 
 
 		 332 aa  334  1e-90  Sinorhizobium medicae WSM419  Bacteria  normal  0.473646  normal  0.0264882 
 
 
-
 
NC_009428  Rsph17025_2828  substrate-binding region of ABC-type glycine betaine transport system  49.16 
 
 		 333 aa  322  8e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.23634 
 
 
-
 
NC_009050  Rsph17029_3787  substrate-binding region of ABC-type glycine betaine transport system  47.2 
 
 		 333 aa  320  1.9999999999999998e-86  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.347149 
 
 
-
 
NC_009636  Smed_0650  substrate-binding region of ABC-type glycine betaine transport system  47.32 
 
 		 332 aa  320  1.9999999999999998e-86  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.324621 
 
 
-
 
NC_008686  Pden_1195  substrate-binding region of ABC-type glycine betaine transport system  46.55 
 
 		 333 aa  320  1.9999999999999998e-86  Paracoccus denitrificans PD1222  Bacteria  normal  0.353421  normal  1 
 
 
-
 
NC_008686  Pden_0945  substrate-binding region of ABC-type glycine betaine transport system  46.55 
 
 		 333 aa  320  1.9999999999999998e-86  Paracoccus denitrificans PD1222  Bacteria  normal  0.249192  normal  1 
 
 
-
 
NC_007494  RSP_3059  ABC proline/glycine betaine transporter, periplasmic substrate-binding protein  48.66 
 
 		 333 aa  319  3e-86  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.78778  n/a   
 
 
-
 
NC_008687  Pden_3856  substrate-binding region of ABC-type glycine betaine transport system  45.48 
 
 		 331 aa  313  1.9999999999999998e-84  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.215076 
 
 
-
 
NC_012848  Rleg_4822  Substrate-binding region of ABC-type glycine betaine transport system  42.94 
 
 		 333 aa  306  5.0000000000000004e-82  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_4910  Substrate-binding region of ABC-type glycine betaine transport system  43.24 
 
 		 333 aa  305  1.0000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_2382  Substrate-binding region of ABC-type glycine betaine transport system  42.12 
 
 		 331 aa  300  2e-80  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0539771  hitchhiker  0.00933627 
 
 
-
 
NC_011369  Rleg2_2138  Substrate-binding region of ABC-type glycine betaine transport system  41.82 
 
 		 331 aa  294  2e-78  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0458223  normal  0.188194 
 
 
-
 
NC_009620  Smed_4889  substrate-binding region of ABC-type glycine betaine transport system  43.69 
 
 		 333 aa  289  5.0000000000000004e-77  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.64177 
 
 
-
 
NC_011369  Rleg2_2919  Substrate-binding region of ABC-type glycine betaine transport system  40.95 
 
 		 333 aa  280  3e-74  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0603439  normal  1 
 
 
-
 
NC_003910  CPS_4933  amino acid ABC transporter, periplasmic amino acid-binding protein  41.19 
 
 		 323 aa  266  5e-70  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1285  Substrate-binding region of ABC-type glycine betaine transport system  31.95 
 
 		 334 aa  167  2e-40  Meiothermus ruber DSM 1279  Bacteria  normal  0.435568  normal  0.230718 
 
 
-
 
NC_008346  Swol_1738  ABC transporter substrate-binding protein  30.72 
 
 		 340 aa  156  5.0000000000000005e-37  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0735907  n/a   
 
 
-
 
NC_009636  Smed_2583  substrate-binding region of ABC-type glycine betaine transport system  29.71 
 
 		 344 aa  156  6e-37  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.201596 
 
 
-
 
NC_009656  PSPA7_5836  hypothetical protein  28.32 
 
 		 356 aa  155  8e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_67400  putative ABC transporter, periplasmic substrate-binding protein  27.91 
 
 		 340 aa  154  2e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2845  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  31.83 
 
 		 345 aa  153  2.9999999999999998e-36  Burkholderia sp. 383  Bacteria  normal  1  normal  0.894091 
 
 
-
 
NC_007005  Psyr_3778  substrate-binding region of ABC-type glycine betaine transport system  29.46 
 
 		 337 aa  152  5.9999999999999996e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.110017 
 
 
-
 
NC_008254  Meso_2543  substrate-binding region of ABC-type glycine betaine transport system  30.09 
 
 		 342 aa  147  3e-34  Chelativorans sp. BNC1  Bacteria  normal  0.221502  n/a   
 
 
-
 
NC_009832  Spro_0802  substrate-binding region of ABC-type glycine betaine transport system  28.99 
 
 		 321 aa  145  1e-33  Serratia proteamaculans 568  Bacteria  normal  0.0332812  normal  1 
 
 
-
 
NC_009719  Plav_1066  substrate-binding region of ABC-type glycine betaine transport system  30.32 
 
 		 633 aa  143  3e-33  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4344  substrate-binding region of ABC-type glycine betaine transport system  28.57 
 
 		 337 aa  143  4e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_1086  substrate-binding region of ABC-type glycine betaine transport system  25.81 
 
 		 646 aa  142  5e-33  Psychrobacter cryohalolentis K5  Bacteria  normal  0.809733  normal  0.592465 
 
 
-
 
NC_009656  PSPA7_5830  ABC transporter periplasmic binding protein  27.33 
 
 		 322 aa  142  8e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_67300  putative binding protein component of ABC transporter  27.16 
 
 		 322 aa  141  9.999999999999999e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_1376  substrate-binding region of ABC-type glycine betaine transport system  26.69 
 
 		 652 aa  139  7e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  1  hitchhiker  0.000369923 
 
 
-
 
NC_007492  Pfl01_3319  substrate-binding region of ABC-type glycine betaine transport system  27.35 
 
 		 337 aa  137  3.0000000000000003e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_4829  substrate-binding region of ABC-type glycine betaine transport system  28.57 
 
 		 322 aa  135  9.999999999999999e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.93299 
 
 
-
 
NC_004578  PSPTO_5271  histidine transporter, periplasmic histidine-binding protein  27.86 
 
 		 322 aa  133  3.9999999999999996e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1600  ABC transporter, periplasmic substrate-binding protein, putative  27.22 
 
 		 337 aa  132  9e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.865849  n/a   
 
 
-
 
NC_009512  Pput_2216  substrate-binding region of ABC-type glycine betaine transport system  26.45 
 
 		 338 aa  130  3e-29  Pseudomonas putida F1  Bacteria  normal  0.228946  normal  1 
 
 
-
 
NC_007492  Pfl01_0362  substrate-binding region of ABC-type glycine betaine transport system  27.73 
 
 		 322 aa  129  8.000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.376501  normal  1 
 
 
-
 
NC_002947  PP_3558  substrate-binding region of ABC-type glycine betaine transport system  26.16 
 
 		 338 aa  127  4.0000000000000003e-28  Pseudomonas putida KT2440  Bacteria  normal  0.561868  normal  1 
 
 
-
 
NC_010322  PputGB1_2363  substrate-binding region of ABC-type glycine betaine transport system  26.46 
 
 		 338 aa  126  5e-28  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_2048  Substrate-binding region of ABC-type glycine betaine transport system  25.53 
 
 		 341 aa  122  7e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0715987  decreased coverage  0.00000000000901879 
 
 
-
 
NC_013947  Snas_2396  Substrate-binding region of ABC-type glycine betaine transport system  22.26 
 
 		 314 aa  79.7  0.00000000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.83747  hitchhiker  0.000913379 
 
 
-
 
NC_011370  Rleg2_6171  Substrate-binding region of ABC-type glycine betaine transport system  25.98 
 
 		 318 aa  76.3  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.367394 
 
 
-
 
NC_014165  Tbis_1134  glycine betaine ABC transporter substrate-binding protein  22.88 
 
 		 317 aa  74.3  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.71375 
 
 
-
 
NC_013595  Sros_1794  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  21.48 
 
 		 330 aa  65.9  0.0000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_3224  substrate-binding region of ABC-type glycine betaine transport system  21.45 
 
 		 323 aa  63.5  0.000000005  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1793  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  21.74 
 
 		 308 aa  61.2  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_3713  substrate-binding region of ABC-type glycine betaine transport system  22.47 
 
 		 336 aa  57  0.0000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.252604  normal  1 
 
 
-
 
NC_009380  Strop_1643  substrate-binding region of ABC-type glycine betaine transport system  21.81 
 
 		 323 aa  56.6  0.0000005  Salinispora tropica CNB-440  Bacteria  normal  0.010471  normal  1 
 
 
-
 
NC_009953  Sare_1628  substrate-binding region of ABC-type glycine betaine transport system  21.86 
 
 		 324 aa  57  0.0000005  Salinispora arenicola CNS-205  Bacteria  normal  0.634582  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2798  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  23 
 
 		 314 aa  53.9  0.000004  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011883  Ddes_0822  Substrate-binding region of ABC-type glycine betaine transport system  22.15 
 
 		 287 aa  52.8  0.000008  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_008392  Bamb_5760  substrate-binding region of ABC-type glycine betaine transport system  22.37 
 
 		 293 aa  51.2  0.00002  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_5464  Substrate-binding region of ABC-type glycine betaine transport system  22.45 
 
 		 312 aa  50.1  0.00005  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.102731 
 
 
-
 
NC_008751  Dvul_0958  substrate-binding region of ABC-type glycine betaine transport system  22.15 
 
 		 285 aa  50.4  0.00005  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00282078  normal  0.248441 
 
 
-
 
NC_009439  Pmen_0488  substrate-binding region of ABC-type glycine betaine transport system  22.42 
 
 		 314 aa  50.1  0.00005  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_2780  substrate-binding region of ABC-type glycine betaine transport system  22.12 
 
 		 325 aa  49.7  0.00006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_4895  putative ABC transporter, substrate-binding protein  25.12 
 
 		 318 aa  49.7  0.00007  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_0063  substrate-binding region of ABC-type glycine betaine transport system  23.18 
 
 		 306 aa  49.7  0.00007  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0485  substrate-binding region of ABC-type glycine betaine transport system  22.26 
 
 		 314 aa  49.3  0.00009  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009668  Oant_2920  substrate-binding region of ABC-type glycine betaine transport system  21.65 
 
 		 308 aa  48.9  0.0001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6868  substrate-binding region of ABC-type glycine betaine transport system  21.69 
 
 		 293 aa  48.9  0.0001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2313  substrate-binding region of ABC-type glycine betaine transport system  21.41 
 
 		 308 aa  48.9  0.0001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_1517  substrate-binding region of ABC-type glycine betaine transport system  20.75 
 
 		 316 aa  48.9  0.0001  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00127851  n/a   
 
 
-
 
NC_007519  Dde_0675  glycine/betaine/L-proline ABC transporter, periplasmic-binding protein  24.68 
 
 		 279 aa  48.1  0.0002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000223596  n/a   
 
 
-
 
NC_009656  PSPA7_6163  hypothetical protein  22.22 
 
 		 312 aa  47.8  0.0003  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_1043  Substrate-binding region of ABC-type glycine betaine transport system  20.88 
 
 		 287 aa  47.4  0.0003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_008709  Ping_3427  substrate-binding region of ABC-type glycine betaine transport system  21.41 
 
 		 310 aa  47  0.0004  Psychromonas ingrahamii 37  Bacteria  normal  1  hitchhiker  0.00319099 
 
 
-
 
NC_007963  Csal_1901  substrate-binding region of ABC-type glycine betaine transport system  22.33 
 
 		 294 aa  46.6  0.0005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.135733  n/a   
 
 
-
 
NC_004578  PSPTO_3058  glycine betaine ABC transporter, periplasmic glycine betaine-binding protein  25.42 
 
 		 325 aa  46.6  0.0006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.302341  n/a   
 
 
-
 
NC_009049  Rsph17029_0853  substrate-binding region of ABC-type glycine betaine transport system  21.04 
 
 		 308 aa  45.8  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.564926  normal  1 
 
 
-
 
NC_007493  RSP_2181  ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit  21.04 
 
 		 308 aa  45.8  0.001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_71030  hypothetical protein  21.88 
 
 		 312 aa  45.1  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008531  LEUM_0358  ABC-type proline/glycine betaine transport system, permease component  22.96 
 
 		 571 aa  44.7  0.002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.963399  n/a   
 
 
-
 
NC_007492  Pfl01_0025  substrate-binding region of ABC-type glycine betaine transport system  20.97 
 
 		 305 aa  44.7  0.002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.106861  normal  1 
 
 
-
 
NC_007005  Psyr_2916  substrate-binding region of ABC-type glycine betaine transport system  23.44 
 
 		 314 aa  44.3  0.003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.056066  normal  0.0916601 
 
 
-
 
NC_007492  Pfl01_5230  substrate-binding region of ABC-type glycine betaine transport system  24.18 
 
 		 314 aa  43.5  0.006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.184676  normal  0.0260977 
 
 
-
 
NC_010322  PputGB1_2691  glycine betaine transporter periplasmic subunit  23.62 
 
 		 342 aa  43.1  0.007  Pseudomonas putida GB-1  Bacteria  normal  0.208597  normal  0.538779 
 
 
-
 
NC_009784  VIBHAR_06178  glycine betaine/L-proline ABC transporter glycine betaine/L-proline-binding  23.92 
 
 		 309 aa  43.1  0.007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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