| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4895 |
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| Symbol | |
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| ID | 3523127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5188334 |
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| End bp | 5189290 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637287334 |
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| Product | putative ABC transporter, substrate-binding protein |
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| Protein accession | YP_271534 |
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| Protein GI | 71282652 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA GTTATTACGT TAAGACCTTA TTCTCATTAC TATTTTTTTC CAGCACATTA
TGGTCCAAAC CGTCTCACCC TACAGATAAA GTCGTTATAC CAACAAATAA CTGGTCAAGC
CAGCGGGTAT TGTCAAACGT TGTTGGTCAG TTAATTGAAA ATTTAGGTAC CCCGGTAGAG
TACATAAACA TTAGTGCTGA CCGACAATGG GGAGCACTGA AACGTGGAGT TATTCATTTT
CAAATAGAAG TATGGGAACC GTCAATGGGG CAAGAGTTCA ATAAGCTTGT CGCTAACGGT
GATATTATTG ATTTAGGAAC ACATGAAGCC AAAGTAGTAG AAGATTGGTG GTACCCAAAA
TATGTGGAAG ATTTATGTCC TGAATTACCC CAGTGGCAAG CTTTAAATAA ATGTAGAGCA
CTTTTTAAGG GGTCGAAAAC AACGGAAAAA GGTATATATT TTGGTGGCCC ATGGAATTAT
GGTGATGCTG ATATTATTCG AGCGTTAGGG CTAAAGTTTG CCATTGAACG TTTACCTGAT
GAATCAGCAT TGTGGGAAGC ACTTACCCTT GCGATTGAAA AAAAGCGCCC TATCCTCTTG
TTAAATTGGA GCCCTAATTG GACCGACAAT TATATCGAAG GTGAATTTGT CAATTTTCCT
CTGTATACAG AACAGTGTGA AAATATACCC GAGTGGGGAC TCAATAAAAA ATTAGTTAAA
GACTGTGGCA ACCGCAGAGG CGGATGGTTA AAAAAAGCAG CGGCGCCAAA TTTAAAACAA
AAATTTCCTT GTGTATATCA CTTAATTCAA AACATTAGTT TTACCAACCG TATGATTACC
GATGCATCTT CTTTAGCGGT TATAACAAGG CTTTCAGATC AGGACGCCGC TAATGAATGG
TCAAAGAAAT ATGCTAAAGA TATCAAAAAG TGGTCATCGT TAGAGTGTCA GCAATAA
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| Protein sequence | MNNSYYVKTL FSLLFFSSTL WSKPSHPTDK VVIPTNNWSS QRVLSNVVGQ LIENLGTPVE
YINISADRQW GALKRGVIHF QIEVWEPSMG QEFNKLVANG DIIDLGTHEA KVVEDWWYPK
YVEDLCPELP QWQALNKCRA LFKGSKTTEK GIYFGGPWNY GDADIIRALG LKFAIERLPD
ESALWEALTL AIEKKRPILL LNWSPNWTDN YIEGEFVNFP LYTEQCENIP EWGLNKKLVK
DCGNRRGGWL KKAAAPNLKQ KFPCVYHLIQ NISFTNRMIT DASSLAVITR LSDQDAANEW
SKKYAKDIKK WSSLECQQ
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