79 homologs were found in PanDaTox collection
for query gene CPS_4895 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003910  CPS_4895  putative ABC transporter, substrate-binding protein  100 
 
 		 318 aa  657    Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_3427  substrate-binding region of ABC-type glycine betaine transport system  35.41 
 
 		 310 aa  201  1.9999999999999998e-50  Psychromonas ingrahamii 37  Bacteria  normal  1  hitchhiker  0.00319099 
 
 
-
 
NC_011370  Rleg2_6171  Substrate-binding region of ABC-type glycine betaine transport system  29.08 
 
 		 318 aa  163  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.367394 
 
 
-
 
NC_013595  Sros_1794  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  28.26 
 
 		 330 aa  89.7  5e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1793  ABC-type proline/glycine betaine transport systems periplasmic components-like protein  25.4 
 
 		 308 aa  88.6  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1134  glycine betaine ABC transporter substrate-binding protein  25 
 
 		 317 aa  76.3  0.0000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.71375 
 
 
-
 
NC_009380  Strop_1643  substrate-binding region of ABC-type glycine betaine transport system  22.18 
 
 		 323 aa  73.6  0.000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.010471  normal  1 
 
 
-
 
NC_009953  Sare_1628  substrate-binding region of ABC-type glycine betaine transport system  22.18 
 
 		 324 aa  72.8  0.000000000008  Salinispora arenicola CNS-205  Bacteria  normal  0.634582  normal  1 
 
 
-
 
NC_013947  Snas_2396  Substrate-binding region of ABC-type glycine betaine transport system  24.84 
 
 		 314 aa  64.3  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.83747  hitchhiker  0.000913379 
 
 
-
 
NC_009953  Sare_3224  substrate-binding region of ABC-type glycine betaine transport system  22.46 
 
 		 323 aa  62  0.00000001  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1285  Substrate-binding region of ABC-type glycine betaine transport system  20.91 
 
 		 334 aa  58.9  0.0000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.435568  normal  0.230718 
 
 
-
 
NC_004116  SAG1796  amino acid ABC transporter, permease protein  23.63 
 
 		 575 aa  55.8  0.0000009  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.135141  n/a   
 
 
-
 
NC_007492  Pfl01_0025  substrate-binding region of ABC-type glycine betaine transport system  23.3 
 
 		 305 aa  55.5  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.106861  normal  1 
 
 
-
 
NC_010322  PputGB1_0092  choline ABC transporter, periplasmic binding protein  23.57 
 
 		 307 aa  54.7  0.000002  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.000000000618181 
 
 
-
 
NC_009253  Dred_0473  substrate-binding region of ABC-type glycine betaine transport system  24.74 
 
 		 284 aa  52.4  0.000009  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RSp0064  putative glycine betaine transmembrane and periplasmic ABC transporter protein  24.41 
 
 		 289 aa  52  0.00001  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.321585 
 
 
-
 
NC_008686  Pden_1195  substrate-binding region of ABC-type glycine betaine transport system  27.42 
 
 		 333 aa  52.4  0.00001  Paracoccus denitrificans PD1222  Bacteria  normal  0.353421  normal  1 
 
 
-
 
NC_008686  Pden_0945  substrate-binding region of ABC-type glycine betaine transport system  27.42 
 
 		 333 aa  52.4  0.00001  Paracoccus denitrificans PD1222  Bacteria  normal  0.249192  normal  1 
 
 
-
 
NC_004578  PSPTO_0166  glycine/betaine family, ABC transporter, substrate-binding protein  23.43 
 
 		 308 aa  52.4  0.00001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0028  substrate-binding region of ABC-type glycine betaine transport system  23.18 
 
 		 308 aa  51.2  0.00002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4813  substrate-binding region of ABC-type glycine betaine transport system  24.44 
 
 		 287 aa  51.2  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  0.0324269  n/a   
 
 
-
 
NC_007650  BTH_II1859  ABC transporter, periplasmic glycine/betaine-binding protein  24.27 
 
 		 287 aa  51.2  0.00003  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_0092  substrate-binding region of ABC-type glycine betaine transport system  23.25 
 
 		 307 aa  50.8  0.00003  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_0076  glycine betaine-binding protein, putative  23.25 
 
 		 313 aa  50.8  0.00003  Pseudomonas putida KT2440  Bacteria  normal  1  hitchhiker  0.000390865 
 
 
-
 
NC_008346  Swol_1738  ABC transporter substrate-binding protein  22.96 
 
 		 340 aa  50.4  0.00004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0735907  n/a   
 
 
-
 
NC_008751  Dvul_0958  substrate-binding region of ABC-type glycine betaine transport system  25.41 
 
 		 285 aa  50.4  0.00004  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00282078  normal  0.248441 
 
 
-
 
NC_010718  Nther_2048  Substrate-binding region of ABC-type glycine betaine transport system  21.83 
 
 		 341 aa  50.1  0.00005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0715987  decreased coverage  0.00000000000901879 
 
 
-
 
NC_007492  Pfl01_3319  substrate-binding region of ABC-type glycine betaine transport system  25.27 
 
 		 337 aa  50.1  0.00006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_1086  substrate-binding region of ABC-type glycine betaine transport system  26.24 
 
 		 646 aa  48.9  0.0001  Psychrobacter cryohalolentis K5  Bacteria  normal  0.809733  normal  0.592465 
 
 
-
 
NC_007005  Psyr_3778  substrate-binding region of ABC-type glycine betaine transport system  24.19 
 
 		 337 aa  48.5  0.0001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.110017 
 
 
-
 
NC_004578  PSPTO_5271  histidine transporter, periplasmic histidine-binding protein  24.73 
 
 		 322 aa  48.5  0.0001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_008392  Bamb_5760  substrate-binding region of ABC-type glycine betaine transport system  22.86 
 
 		 293 aa  48.5  0.0001  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4344  substrate-binding region of ABC-type glycine betaine transport system  24.06 
 
 		 337 aa  48.1  0.0002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_4829  substrate-binding region of ABC-type glycine betaine transport system  24.73 
 
 		 322 aa  48.1  0.0002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.93299 
 
 
-
 
NC_010501  PputW619_0095  choline ABC transporter, periplasmic binding protein  23.4 
 
 		 307 aa  47.8  0.0003  Pseudomonas putida W619  Bacteria  normal  0.582516  hitchhiker  0.0000731437 
 
 
-
 
NC_009901  Spea_0257  substrate-binding region of ABC-type glycine betaine transport system  25.53 
 
 		 334 aa  47.8  0.0003  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4889  substrate-binding region of ABC-type glycine betaine transport system  25.27 
 
 		 333 aa  47.4  0.0003  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.64177 
 
 
-
 
NC_006349  BMAA0480  ABC transporter, periplasmic glycine/betaine-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia mallei ATCC 23344  Bacteria  normal  0.84845  n/a   
 
 
-
 
NC_011894  Mnod_3406  Substrate-binding region of ABC-type glycine betaine transport system  23.81 
 
 		 278 aa  47.4  0.0004  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3169  substrate-binding region of ABC-type glycine betaine transport system  26.37 
 
 		 284 aa  47  0.0004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4235  ABC transporter substrate-binding protein  23.41 
 
 		 334 aa  47.4  0.0004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.663539  hitchhiker  0.000000168008 
 
 
-
 
NC_009719  Plav_1066  substrate-binding region of ABC-type glycine betaine transport system  24 
 
 		 633 aa  47  0.0004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2117  ABC transporter, periplasmic glycine/betaine-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.480909  n/a   
 
 
-
 
NC_009079  BMA10247_A1970  quaternary amine ABC transporter periplasmic substrate-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0749  quaternary amine ABC transporter periplasmic substrate-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A0837  quaternary amine ABC transporter periplasmic substrate-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0997  quaternary amine ABC transporter periplasmic substrate-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.166276  n/a   
 
 
-
 
NC_008784  BMASAVP1_0701  quaternary amine ABC transporter periplasmic substrate-binding protein  22.89 
 
 		 287 aa  47.4  0.0004  Burkholderia mallei SAVP1  Bacteria  normal  0.504672  n/a   
 
 
-
 
NC_009439  Pmen_0484  substrate-binding region of ABC-type glycine betaine transport system  25.7 
 
 		 283 aa  47  0.0005  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_5076  substrate-binding region of ABC-type glycine betaine transport system  24.19 
 
 		 287 aa  46.6  0.0006  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_3292  substrate-binding region of ABC-type glycine betaine transport system  24.19 
 
 		 287 aa  46.2  0.0007  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_1845  substrate-binding region of ABC-type glycine betaine transport system  24.6 
 
 		 334 aa  46.2  0.0007  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00000186809  normal  0.0102549 
 
 
-
 
NC_008942  Mlab_1062  hypothetical protein  19.74 
 
 		 298 aa  45.8  0.0009  Methanocorpusculum labreanum Z  Archaea  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1600  ABC transporter, periplasmic substrate-binding protein, putative  24.54 
 
 		 337 aa  45.4  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.865849  n/a   
 
 
-
 
NC_010623  Bphy_3294  substrate-binding region of ABC-type glycine betaine transport system  24.55 
 
 		 287 aa  45.8  0.001  Burkholderia phymatum STM815  Bacteria  normal  0.700839  normal  1 
 
 
-
 
NC_010552  BamMC406_5013  substrate-binding region of ABC-type glycine betaine transport system  23.46 
 
 		 287 aa  45.4  0.001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.773221  normal  1 
 
 
-
 
NC_008391  Bamb_4488  substrate-binding region of ABC-type glycine betaine transport system  24.02 
 
 		 287 aa  45.4  0.001  Burkholderia ambifaria AMMD  Bacteria  normal  0.515487  normal  1 
 
 
-
 
NC_010086  Bmul_3556  substrate-binding region of ABC-type glycine betaine transport system  24.08 
 
 		 287 aa  45.8  0.001  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013223  Dret_1056  Substrate-binding region of ABC-type glycine betaine transport system  21.43 
 
 		 305 aa  45.1  0.001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.511062  normal  0.0333795 
 
 
-
 
NC_012848  Rleg_4822  Substrate-binding region of ABC-type glycine betaine transport system  21.45 
 
 		 333 aa  45.1  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0580  ABC proline/glycine betaine transporter, periplasmic ligand binding protein  24.08 
 
 		 287 aa  45.1  0.002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5209  substrate-binding region of ABC-type glycine betaine transport system  24.08 
 
 		 287 aa  44.7  0.002  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0675  glycine/betaine/L-proline ABC transporter, periplasmic-binding protein  25.12 
 
 		 279 aa  45.1  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000223596  n/a   
 
 
-
 
NC_011368  Rleg2_4910  Substrate-binding region of ABC-type glycine betaine transport system  23.95 
 
 		 333 aa  45.1  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2581  substrate-binding region of ABC-type glycine betaine transport system  20.36 
 
 		 332 aa  44.7  0.002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_0343  Substrate-binding region of ABC-type glycine betaine transport system  27.35 
 
 		 313 aa  43.9  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0503  ABC glycine betaine/L-proline transporter, substrate-binding subunit  20.22 
 
 		 290 aa  44.3  0.003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.123581  n/a   
 
 
-
 
NC_010172  Mext_3733  substrate-binding region of ABC-type glycine betaine transport system  22.31 
 
 		 278 aa  43.9  0.004  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.409518 
 
 
-
 
NC_008463  PA14_67400  putative ABC transporter, periplasmic substrate-binding protein  21.88 
 
 		 340 aa  43.5  0.004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_00360  hypothetical protein  24.05 
 
 		 307 aa  43.9  0.004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.116277 
 
 
-
 
NC_013223  Dret_0351  Substrate-binding region of ABC-type glycine betaine transport system  19.47 
 
 		 282 aa  43.5  0.005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0235  substrate-binding region of ABC-type glycine betaine transport system  22.22 
 
 		 286 aa  43.5  0.005  Halorhodospira halophila SL1  Bacteria  hitchhiker  0.00289978  n/a   
 
 
-
 
NC_011989  Avi_2573  ABC transporter substrate binding protein  23.62 
 
 		 332 aa  43.1  0.006  Agrobacterium vitis S4  Bacteria  normal  0.0219871  n/a   
 
 
-
 
NC_011728  BbuZS7_0144  glycine betaine, L-proline ABC transporter, glycine/betaine/L-proline-binding protein  21.89 
 
 		 290 aa  43.1  0.007  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_1909  substrate-binding region of ABC-type glycine betaine transport system  22.83 
 
 		 285 aa  43.1  0.007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_5830  ABC transporter periplasmic binding protein  25.78 
 
 		 322 aa  42.7  0.009  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_1472  Substrate-binding region of ABC-type glycine betaine transport system  21 
 
 		 280 aa  42.4  0.009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.338312  hitchhiker  0.00631972 
 
 
-
 
NC_009636  Smed_0650  substrate-binding region of ABC-type glycine betaine transport system  26.15 
 
 		 332 aa  42.7  0.009  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.324621 
 
 
-
 
NC_008463  PA14_22330  putative glycine betaine-binding protein precursor  20.42 
 
 		 285 aa  42.7  0.009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.0000000000000132324 
 
 
-
 
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