Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_1909 |
Symbol | |
ID | 5345563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 2022612 |
End bp | 2023469 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640839465 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001375191 |
Protein GI | 152975674 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAA AAATATGGCT TATTAGTATC TTGTTATTTA TCAGTATGAT TATTACTTCT TGTAATGCAA CAAATGCAAA TACAAAAGGA AAAATTAAAC TTGGTGTTAC AAGTTGGAAA GAAAATATTG CAATTGCAAA TTTATGGAAA GTTTTGCTAG AACAAAAAGG ATATAAAGTA GAGCCAATGT ATTTAGAAAA AGCAGCCATT TGGACTGGTG TTGCTCGTGG TGATATAGAT GCAAATTTAG AAGTTTGGCT TCCAGTTACC GATAAACCGT TAAATAATCG GTATAAAAAT GATATCGTTT TAAAAGCAAA ATGGTATGAA GGAACGGGAC TTGGCTTAGT TGTTCCTTCT TACATGACAG ACGTTAACAG CATCGAAGAT TTAAATGCTC ATAAAGAAGA ATTCGGTAAT AAAATTGTCG GTATTGAACC AGGTAGTAGC TTGATGAATT TAACAAATAA AGCGATGAAA GAATATGATG TAAAGTTAAA ACTTGTCCAA TCTTCAGAAG CGGCCATGAT GAGTGAATTA AAAAAAGCAT ATACACAAAA GAAACCAATC GCTGTGACGC TTTGGAATCC ACACTGGGGC TTTTCAGAAT TTGATTTAAA ATATTTAAAA GACCCTAAGA AAGTATATGG TGAAAAAGAC GACATTTATT ACTCTGTAAG AAAAGGATTT GAAAAAGATT ATCCAGATGT TGTGAAATAT TTTGATAGAT GGAAAATGAA TGATGAACAA CTTGGTACTT TAATGGTTAT GTTAAATAAA ATAAAAGATC CTGAAGAAGC GGCACGAAAA TGGATTAAAA AGAACCAAAG ACTTGTGAAT GAGTGGATGA AAGAATAA
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Protein sequence | MKRKIWLISI LLFISMIITS CNATNANTKG KIKLGVTSWK ENIAIANLWK VLLEQKGYKV EPMYLEKAAI WTGVARGDID ANLEVWLPVT DKPLNNRYKN DIVLKAKWYE GTGLGLVVPS YMTDVNSIED LNAHKEEFGN KIVGIEPGSS LMNLTNKAMK EYDVKLKLVQ SSEAAMMSEL KKAYTQKKPI AVTLWNPHWG FSEFDLKYLK DPKKVYGEKD DIYYSVRKGF EKDYPDVVKY FDRWKMNDEQ LGTLMVMLNK IKDPEEAARK WIKKNQRLVN EWMKE
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