| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0166 |
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| Symbol | |
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| ID | 1181774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 186464 |
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| End bp | 187390 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637391543 |
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| Product | glycine/betaine family, ABC transporter, substrate-binding protein |
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| Protein accession | NP_790025 |
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| Protein GI | 28867406 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGT TATCCACAGC CGTTGCGGTC GCGGTCATGA CGTTTGGCAG CTTCGCCGCG
CAGGCAGAGG ACGCAAGTTG CAGCACCGTG AAGATGGCCG ATACGGGCTG GAGTGACATT
GCCGCCACCA ACGCTATCAC CGGCGTGGTG CTTGAAGGTC TGGGTTACAA GGCCAAGGTC
GACACGCTCG CAGTGCCGAT TGCCTATGGC GGTTTGAAGG ACGGCAAGCT GGATGTGTTT
CTGGGTAACT GGATGCCGGC GCAGCAGGGC TTTTACGACA AGTTCGTGGC CACCGGTGAC
GTGACGCAAC TGGCCAGGAA CCTTGAAGGC ACCGAGTTCA CGCTGGCCGT GCCGGACTAC
GTCTGGGAGG CCGGCGTGCA TGATTTTACC GACCTGAGCA AATTCGCCGA AAAATTCGAC
AAGAAAATCT ACGGTATCGG CTCCGGCGCG CCGGCCAACC TGTCGTTGCA GGAGATCATC
AAGAAGAACG AGTTTGATCT GGGCCAATGG AAGCTGGTGG AGTCCAGCGA GCAGGCCATG
CTCGCCGAGG TCAATCGCAA TGTGAAGAAG AAGGCGTTTG TGGTCTTCCT CGGCTGGACA
CCGCACCCGA TGAATGTGCA GATCAAAGGC ATGCACTACC TCAAGGGCGG CGAGAAATAC
TTTGGCGACA CCGGCTCTGT CTTCACCCTG ACCCGCAAGG GTTATGCACA AGCCTGCCCG
AACGTCGGCA AGCTGCTGAC CAACCTGAGC TTCACCCTGG ACATGGAAAA CAGCATCATG
GCCGAGGTGA CCAACAAGAA GCTCAGCAAT AGCGCAGCCG CCAAAGCCTG GATCAAGGCC
AACCCTGCGG TACTGGACAC GTGGCTGGAG GGCGTGAAGA CGGTTGATGG CAAAGACGGG
CTGGCGGCAG TGAAGGCGAA GTTGTAG
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| Protein sequence | MKQLSTAVAV AVMTFGSFAA QAEDASCSTV KMADTGWSDI AATNAITGVV LEGLGYKAKV
DTLAVPIAYG GLKDGKLDVF LGNWMPAQQG FYDKFVATGD VTQLARNLEG TEFTLAVPDY
VWEAGVHDFT DLSKFAEKFD KKIYGIGSGA PANLSLQEII KKNEFDLGQW KLVESSEQAM
LAEVNRNVKK KAFVVFLGWT PHPMNVQIKG MHYLKGGEKY FGDTGSVFTL TRKGYAQACP
NVGKLLTNLS FTLDMENSIM AEVTNKKLSN SAAAKAWIKA NPAVLDTWLE GVKTVDGKDG
LAAVKAKL
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