| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0484 |
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| Symbol | |
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| ID | 5108403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 518799 |
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| End bp | 519650 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501697 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001185986 |
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| Protein GI | 146305521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAT TCAAACACCT CTGCCTTGGC GCTGCCGCCC TGGCCATCGG CATGGGCAGC
GCCCTGGCCG CCGACAAACC CACCTTGAAG ATCGGCTACG TCAACGGCTG GGACGACAGC
GTCGCCGTCA CCCACGTCGC CGGTGAAATC CTGCAAAGCA AACTCGGCTA CGCGGTCGAA
CTGAAGCCGG TCGAACCCGC CATCATGTGG CAGGGCGTGG CCCGCGGCGA CCTGGACGCC
ACCCTCTCCG CCTGGCTGCC GGCCACCCAT GGCGAGTACT ACGAGAAGCT CAAGGACAAG
GTGGAAGTGC TTGGCACCAA CTACTCCGGC GCCAAGATCG GCCTGATCGT GCCGGATTAC
GTCGAAGCCA AGACCATCGA AGACCTGGAG AAGTACGCCA AGGACTTCGA CGGCAAGATC
ACCGGTATCG ACGCCGGCGC TGGCGTGATG CGCCGCACCG AAGACGCCAT CAAGGAATAC
AACCTGGCCA GCATCAAGCT GATGCCCAGC TCCGGCCCGG CCATGGCTAC CGCCCTGACC
CGTGCCGAGA AGGCGCAGAA GCCGATCGTG GTCACCGGCT GGATCCCGCA CTGGATGTTC
GCCAAGTGGA AGCTGCGCTT CCTCGAAGAC CCGAAGAAGG TCTACGGCGA TGACGAACGC
GTCGACACCG TGGCCAACCC GGAACTCAAG GGCAAGGCGG CCGATGCCGC GGCCTTCCTC
GCCAAGCTGT CCTGGAGCGG CGAGGAAGTC GGTGCGGTGA TGCTGGCCAT CCGCGAAGGC
GCCAAGCCGG AGCAGGCCGC CAAGGACTGG ATCGCCGCCA ACCCGGATCG CGTCGACAGC
TGGCTGAAGT AA
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| Protein sequence | MRVFKHLCLG AAALAIGMGS ALAADKPTLK IGYVNGWDDS VAVTHVAGEI LQSKLGYAVE
LKPVEPAIMW QGVARGDLDA TLSAWLPATH GEYYEKLKDK VEVLGTNYSG AKIGLIVPDY
VEAKTIEDLE KYAKDFDGKI TGIDAGAGVM RRTEDAIKEY NLASIKLMPS SGPAMATALT
RAEKAQKPIV VTGWIPHWMF AKWKLRFLED PKKVYGDDER VDTVANPELK GKAADAAAFL
AKLSWSGEEV GAVMLAIREG AKPEQAAKDW IAANPDRVDS WLK
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