| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1600 |
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| Symbol | |
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| ID | 1183237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1756386 |
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| End bp | 1757399 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392972 |
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| Product | ABC transporter, periplasmic substrate-binding protein, putative |
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| Protein accession | NP_791425 |
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| Protein GI | 28868806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.865849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAC TGATACGACT GCTGAGTTGT TCACTGCTGG CGCTGGGACT GGCCAGTGCG
CCTGCGATGT CTGCTGAAAA AGCCAGGCCG ATCCAGTTTG GCGCACTGAC CTGGGAAAGC
GGCAGCCTGA TCACCGAAGT GCTGCGCACC ATCGTCGAGA AGGGCTATGG CTACCCGACC
GACACCTTGC CCGGCAGCAC CGTCAGCCTG GAAACCGCTC TGGCAAAGAA CGACATCCAG
GTGATTGCCG AAGAGTGGAC CGGACGCAGC CCGGTGTGGG TCAAGGCCGA GGCTGAAGGC
AAGGTGTTGG GGCTGGGCGA TATCGTCAAG CACGCAGACG AAGGCTGGTG GGTGCCTGAG
TATGTGATCA AGGGCGATGC CGCCAAAGGC ATCAAGCCGA TGGCGCCCGA GTTGAAGACG
GTTGAGGATC TGGCACGCTA CAAGGATGTC TTCAAAGACC CGGAGTCGCC TGAAAAAGGC
CGCTTCCTCA ACAGCCCGAG CGGCTGGACC TCAGAGATCG TCAATACGCA AAAGCTCAAG
GCTTATGGCC TCAACGACAG CTTCGTCAAC TTTCGCACAG GTTCGGGGGC AGCGCTGGAT
GCCGAGGTGG CAGCGGCCAT CCGCCTTGGC AAGCCGGTGC TGTTTTACTA CTGGTCGCCA
ACACCGCTGT TGGGCACTTA TAAGTTCATC AAGCTGCAAG AGCCAGCCTT CGACGCTGAA
GCCTGGAAAA CCCTGACCGA CGCCAGTAAC CCCAATCCGC GGGGCACGTC CTCGCTGGCC
GCGACCTTGT CCATTGGTGT GTCCGCAGAA TTCAGCAAGC AGTACCCGGA ACTGGTGAGT
GTCTTCAAAC AGGTCGATTT CCCGATCGGC CTGCTCAACC AGACGCTCAG TGACATGAGC
AAGAAGCATG AAGATCCCAA GGTCGCTGCC ACCAGGTTCC TCAAGCAGAA CCCTGACGTC
TGGAAAACCT GGTTGCCTGC CGATGTTGCC AGTCGGGTCA GTGCAGCCCT TTGA
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| Protein sequence | MRILIRLLSC SLLALGLASA PAMSAEKARP IQFGALTWES GSLITEVLRT IVEKGYGYPT
DTLPGSTVSL ETALAKNDIQ VIAEEWTGRS PVWVKAEAEG KVLGLGDIVK HADEGWWVPE
YVIKGDAAKG IKPMAPELKT VEDLARYKDV FKDPESPEKG RFLNSPSGWT SEIVNTQKLK
AYGLNDSFVN FRTGSGAALD AEVAAAIRLG KPVLFYYWSP TPLLGTYKFI KLQEPAFDAE
AWKTLTDASN PNPRGTSSLA ATLSIGVSAE FSKQYPELVS VFKQVDFPIG LLNQTLSDMS
KKHEDPKVAA TRFLKQNPDV WKTWLPADVA SRVSAAL
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