Gene BMAA0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0480 
Symbol 
ID3087387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp490275 
End bp491138 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID637564399 
ProductABC transporter, periplasmic glycine/betaine-binding protein 
Protein accessionYP_105252 
Protein GI53717109 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.84845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCC TCACGAAACT CATCGGCTGC GGCGTGTTGG CGATGATGCT CGCCGCCGTC 
GCGCCGACGC AGGCCGACAC GAAGCCGACG CTGAAGATCG GCTACGTCGA AGGCTGGGAC
GACAGCGTCG CCACGTCGAA CGTCGCCGCG CGCATCATCG AGACGAAGCT CGGCTATCCG
GTTCAGCTCG TGCCGGTCGC GGCCGGCGTG ATGTGGCAGG GCGTCGCGCG CGGCGATCTC
GACGCGACGC TCTCCGCGTG GCTGCCCGTC ACGCAGGGCG CTTACTGGGA GCAGTTCAAG
ACGAAGGTGG TCAATCTCGG CACCAATTTT CCCGATGCGA AGATCGGCCT CATCGTGCCG
GCCTACGTGA AGGCGAAGAC GATCGCCGAT CTCAATGCGC AGAAGAACGA TTTCGCCGGG
CGCATCGTCG GCATCGACGC CGGCGCGGGC GTGATGCGCA AGACCGACGA CGCGATCAAG
GCGTACGGCC TGAACTATTC GCTGATGCCG AGCTCGGGCA GCGCGATGAC TGCGGAGCTC
GCGCGCTCGA TCCATTCGAA CAAGGCCGTC GTCGTGACCG GCTGGGCGCC GCACTGGATG
TTCGCGAAGT GGAAGCTGCG TTTCCTCGAC GATCCGAAGA AGGTATACGG CGAGGCGGAA
CACGTCGACA ACGTCGTGAA CCCGGCGCTC GAAACGAAAG CGCAGCCCGT CGTCGCGTTC
CTGAAGAAAT TCCAATGGAA ACCGGGCGAG ATCGACGGCG TGATGCTCGC GATCCAGAAC
GGATCGAAGC CCGCGGCGGC GGCCGACGCA TGGATCGCCG CACATGGCGA TCGCGTCGGC
GAATGGCTCG GCGCCGAGCG GTGA
 
Protein sequence
MKFLTKLIGC GVLAMMLAAV APTQADTKPT LKIGYVEGWD DSVATSNVAA RIIETKLGYP 
VQLVPVAAGV MWQGVARGDL DATLSAWLPV TQGAYWEQFK TKVVNLGTNF PDAKIGLIVP
AYVKAKTIAD LNAQKNDFAG RIVGIDAGAG VMRKTDDAIK AYGLNYSLMP SSGSAMTAEL
ARSIHSNKAV VVTGWAPHWM FAKWKLRFLD DPKKVYGEAE HVDNVVNPAL ETKAQPVVAF
LKKFQWKPGE IDGVMLAIQN GSKPAAAADA WIAAHGDRVG EWLGAER