| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1056 |
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| Symbol | |
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| ID | 8418881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1247979 |
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| End bp | 1248896 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037628 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003197922 |
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| Protein GI | 258405180 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.511062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0333795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGAAAC TTCGCAATCT GTCTGTGTGC AGTCTTGTAC TGACCTTATT GGTTGTGGCC
GGCGTGGCCC GGACAAGCTC TGCCGGGCAC GAAACACCGG TGACCTTGGC GTATGTCGAG
TGGTCTTCAG AGGTGGCGAG CACGAATCTG GTCAAAGCAG TTATTCAGGA GAAACTCGAC
CGCCCGTGCC GCATTGTGGC CATGTCGGCC GATGAGATGT GGCGGGCTGT GGCCCAGGGA
TCTGTGGACG GCATGGTATC GGCTTGGCTT CCGGGAACAC AGAGCGAATA TTTGCAACGC
TATGAAGGCC AGGTCATTGA TCTGGGACCG AACCTGGAGG GAACCCGGAT CGGTCTGGTC
GTTCCCAAGG TGACCACCGG CCGACAGACA GCCGGCAGTG GTCTCGAGAA CGAACCTTAC
ATCCCTGTGA CCTCTATCGC CGAGTTGCCG GAGTATGCAG ACAAATTCGA CGGCAAGATC
ATCGGCATTG ATCCGGAAGC CGGGATCATG CACCGGACCG AGGAAGCGTT GCGCGCCTAT
GGGCTGCACA ATTATACCCT GGTCTCCGGC AGTGAAGTGG CCATGACCGC TGAACTGGCC
GATGCCATCC GCAAACGGCA GTGGGTGGTG GTTACCGGCT GGGAACCGCA TTGGATGTTC
GCCCGCTGGC GCTTGGCCTT CCTCGACGAC CCCAAAGAAG TCTTTGGCGG ACGGGAAGCG
ATCCATACCG TTGTTCGCTC GGACTTGCGG GAGGATATGC CGGACGTCTA CAGGTTTTTG
GACAACTTCC AATGGACATC AGAGGATATG GAACAACTCA TGCTCTGGAT AGAAGAGCGA
AAGGGCGTTT ACCCATATGA AAGCGCCCGC CGCTGGATCC GGTACCATAA GGATCAGGTG
GCCTCATGGC TGCCGTGA
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| Protein sequence | MLKLRNLSVC SLVLTLLVVA GVARTSSAGH ETPVTLAYVE WSSEVASTNL VKAVIQEKLD
RPCRIVAMSA DEMWRAVAQG SVDGMVSAWL PGTQSEYLQR YEGQVIDLGP NLEGTRIGLV
VPKVTTGRQT AGSGLENEPY IPVTSIAELP EYADKFDGKI IGIDPEAGIM HRTEEALRAY
GLHNYTLVSG SEVAMTAELA DAIRKRQWVV VTGWEPHWMF ARWRLAFLDD PKEVFGGREA
IHTVVRSDLR EDMPDVYRFL DNFQWTSEDM EQLMLWIEER KGVYPYESAR RWIRYHKDQV
ASWLP
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