| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1845 |
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| Symbol | |
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| ID | 6116108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2281833 |
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| End bp | 2282837 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633348 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001760224 |
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| Protein GI | 170726198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000186809 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0102549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATA TCATTTTAGC CGCTGGCTTA CTAGGTAGCA TTTTTACACA ACAGGTATCG
GCTGAAGGTG AGTGCGGCAA GGTTACCATC GCCGATATGA ATTGGAGCTC AGCGTCACTG
ATTGCTAATG TTGATCGCTT CATTCTTGAA CATGGTTATG GCTGTGAGGC TGAGTTGCTT
CCCGGCGACA CTATGCCAAC CAGTACCTCA ATGATAGAGA AAGGTGAGCC GGATATTGCC
CCTGAGATGT GGAGTAATAG TGTAAAAGAG CTCATTGAAA AAGCAGTAAG TGAAAAGCGC
TTAGTGATTG CGGGACAATC TCTCTCTGAT GGTGGTGAAG AGGGGTTCTG GGTTCCTCAG
TATATGGTTG ATAAAGATCC TAGTTTACAA ACTATTGCTG GCGTTATTGC CAACGTCAAA
TCTTTTAAAC ACCCTGAAGA TCCAGAACGA GGTGCCTTTT ATGGTTGTCC TGCTGGCTGG
GGGTGTCAAT TGTCAGCAGA AAATCTTTAT CGTGCACTTA ATTTGAGTGA TGCAGGCTTT
GATCTCATCG ATCCTGGTTC AGGTGCTGGT TTGGCGGGTT CCATTGCTCG AGCGTATGAG
CGGGAGAAAC CTTGGTTTGG TTATTACTGG GCGCCAACAG CGGTATTAGG TAAGTACAAA
ATGGTCAAAG TCGACTTTGG AACTGGTGTT GATGTTGAGC ATTTTAAAGC GTGTACCTCG
CAAGCTGAAT GTGCGGATCC TAAAGTGACC ATGTATCCAA AGGCGCTCGT TCAAACCATC
ACTACATCTG ATTTCACTAA AAAATCCTCT CAGGGGTTTG ACTACCTCAG CAAACGCGCT
TTCACCAATG AGCAGATGAA TGGTCTACTG GCTTGGATGG AAGATAATCA GGCTGATGGC
GATATTGCTG CTGAATATTT TCTAACAAAT TATGAAGATA TATGGACCCA GTGGGTCGCT
GCTGACGTTG CTGCCAAAGT GAAACAAGCC ATTAAGAACC GATAA
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| Protein sequence | MRNIILAAGL LGSIFTQQVS AEGECGKVTI ADMNWSSASL IANVDRFILE HGYGCEAELL
PGDTMPTSTS MIEKGEPDIA PEMWSNSVKE LIEKAVSEKR LVIAGQSLSD GGEEGFWVPQ
YMVDKDPSLQ TIAGVIANVK SFKHPEDPER GAFYGCPAGW GCQLSAENLY RALNLSDAGF
DLIDPGSGAG LAGSIARAYE REKPWFGYYW APTAVLGKYK MVKVDFGTGV DVEHFKACTS
QAECADPKVT MYPKALVQTI TTSDFTKKSS QGFDYLSKRA FTNEQMNGLL AWMEDNQADG
DIAAEYFLTN YEDIWTQWVA ADVAAKVKQA IKNR
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