Gene Mnod_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3406 
Symbol 
ID7308771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3524868 
End bp3525704 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content58% 
IMG OID643601082 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002498626 
Protein GI220923324 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCAA AGGTGCTCGG GACTCTCCTC TGCCTGACCC TGGTTCAGGG ATCTGCCGAA 
GCGGCAGACA AACAGGTCAG GATTGCCTAC GTAGAGTGGG CCGATGCCGT GGTTGCCACC
AACATTCTCA AGCTCGTTCT TGAGGAGAAG GGCTACCAGG TGAAGACGAT CCCACTCGCC
GCTGCGGCCA TGTGGCAGTC AGTGGCGAAC GGCGATGCGG ATGTAAGCGT TGCAGCTTGG
CTTCCGACCA CGCAGGGCGC CTACTATGCG AAACTCAAGA ACCGCGTCGA TCTCATCGGC
CCCAATGTGA CGGGTGCGAA GATCGGCTGG GTGGTCCCGG CCTATTCCGA TCTGAATTCG
ATCGAGGATC TGAAGTCGAA GGCATCCGAA GTCGATGGCA AGGTCATCGG GATCGATCCC
GGTGCCGGCG TCATGAGAAG CTCTGAAGAG GCGATCAAGG CATACAAGCT TCCGGTCAAG
CTCGTTGACG GCAGCGATGC CACGATGACG AGCGCGCTCA AAGATTCGAT AAGACAAAAG
AAGAACATCG TCGTCACCGC ATGGACGCCG CACTGGATGT TCGCGCGCTA CGATCTGAAA
TACCTCGCCG ATCCCAAGGG GGCGTTCGGT CAGGAAGAGA CCGTGAACAC CCTGGCCCGC
AAAGGGCTCA AGGATGACAT GCCCGAGGTC TACAGGATAC TCCAGAAGTT CAAGCTGACC
ATCAAGGACG AAGAAACCGT GATGGCAGAG AACGAAGAGA AGGGTGCGAA GCCGTCCGAG
ACGGCCGCGA AGTGGATCGC AGAAAATCGC GCGACAGTCG ACAGCTGGCT GAAGTAG
 
Protein sequence
MRAKVLGTLL CLTLVQGSAE AADKQVRIAY VEWADAVVAT NILKLVLEEK GYQVKTIPLA 
AAAMWQSVAN GDADVSVAAW LPTTQGAYYA KLKNRVDLIG PNVTGAKIGW VVPAYSDLNS
IEDLKSKASE VDGKVIGIDP GAGVMRSSEE AIKAYKLPVK LVDGSDATMT SALKDSIRQK
KNIVVTAWTP HWMFARYDLK YLADPKGAFG QEETVNTLAR KGLKDDMPEV YRILQKFKLT
IKDEETVMAE NEEKGAKPSE TAAKWIAENR ATVDSWLK