| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2117 |
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| Symbol | opuC |
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| ID | 3692889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2579306 |
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| End bp | 2580169 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637732371 |
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| Product | ABC transporter, periplasmic glycine/betaine-binding protein |
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| Protein accession | YP_337268 |
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| Protein GI | 76818545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.480909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCC TCACGAAACT CATCGGCTGC GGCGTGTTGG CGATGATGCT CGCCGCCGTC
GCGCCGGCGC AGGCCGACAC GAAGCCGACG CTGAAGATCG GCTACGTCGA AGGCTGGGAC
GACAGCGTCG CCACGTCGAA CGTCGCCGCG CGCATCATCG AGACGAAGCT CGGCTATCCG
GTTCAGCTCG TGCCGGTCGC GGCCGGCGTG ATGTGGCAGG GCGTCGCGCG CGGCGATCTC
GACGCGACGC TCTCCGCGTG GCTGCCCGTC ACGCAGGGCG CTTACTGGGA GCAGTTCAAG
ACGAAGGTGG TCAATCTCGG CACCAATTTT CCCGATGCGA AGATCGGCCT CATCGTGCCG
GCCTACGTGA AGGCGAAGAC GATCGCCGAT CTCAATGCGC AGAAGAACGA TTTCGCCGGG
CGCATCGTCG GCATCGACGC CGGCGCGGGC GTGATGCGCA AGACCGACGA CGCGATCAAG
GCGTACGGCC TGAACTATTC GCTGATGCCG AGCTCGGGCA GCGCGATGAC CGCGGAGCTC
GCGCGCTCGA TCCATTCGAA CAAGGCCGTC GTCGTGACCG GCTGGGCGCC GCACTGGATG
TTCGCGAAGT GGAAGCTGCG TTTCCTCGAC GATCCGAAGA AGGTGTACGG CGAGGCGGAA
CACGTCGACA ACGTCGTGAA CCCGGCGCTC GAAACGAAAG CGCAGCCCGT CGTCGCGTTC
CTGAAGAAAT TCCAATGGAA ACCGGGCGAG ATCGACGGCG TGATGCTCGC TATCCAGAAC
GGATCGAAGC CCGCGGCGGC GGCCGACGCA TGGATCGCCG CACATGGCGA TCGCGTCGGC
GAATGGCTCG GCGCCGAGCG GTGA
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| Protein sequence | MKFLTKLIGC GVLAMMLAAV APAQADTKPT LKIGYVEGWD DSVATSNVAA RIIETKLGYP
VQLVPVAAGV MWQGVARGDL DATLSAWLPV TQGAYWEQFK TKVVNLGTNF PDAKIGLIVP
AYVKAKTIAD LNAQKNDFAG RIVGIDAGAG VMRKTDDAIK AYGLNYSLMP SSGSAMTAEL
ARSIHSNKAV VVTGWAPHWM FAKWKLRFLD DPKKVYGEAE HVDNVVNPAL ETKAQPVVAF
LKKFQWKPGE IDGVMLAIQN GSKPAAAADA WIAAHGDRVG EWLGAER
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