Gene Pfl01_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3319 
Symbol 
ID3713211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3799901 
End bp3800914 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content59% 
IMG OID 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_349048 
Protein GI77459541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAT TTCGACGGTT GCTTGCCGCC GGGTTGACCA CATTCGGTTT GATGACGGTG 
ATGCCTGCGG TGAGCGCGGC GCAGACGCCG ATCCACTTCG CCGATCTGAA CTGGGAAAGC
GGCAGCCTGA TTACCGATGT CCTGCGGATC ATTGTCGAGA AGGGCTATGG GCTTCCGACC
GATACTTTGC CGGGCACCAC CATCACGCTG GAGACCGCAT TGGCCAACAA TGACATTCAG
GTCATCGGCG AAGAATGGGC CGGGCGCAGT CCGGTTTGGG TCAAGGCCGA AGCCGAAGGC
AAGGTCGCCA GCCTGGGCGA TACGGTCAAA GGTGCCACCG AAGGCTGGTG GGTACCGGAA
TACGTGATCA AGGGTGATCC GGCCAAAGGC ATCAAGCCAT TGGCACCGGA CCTGCGCAGT
GTCAGCGATC TGAAGAAGTA CAAGGACGTG TTCAAGGACC CGGAAACCCC GAGCAAGGGA
CGGTTTCTCA ACAGCCCGAT CGGCTGGACG TCGGAGGTGG TGAACAAACA GAAACTGACG
GCTTACGGCT TGCAGGACGA TTTCGTCAAT TTCCGCAGCG GCTCCGGTGC GGCACTCGAT
GCCGAAATCA GCTCATCGAT CCGCCGCGGT AAACCGGTGC TGTTCTATTA CTGGTCGCCG
ACGCCATTGC TCGGCAAGTT CAAGCTGATT CAACTGGAAG AGCCGCCGTT CGATGCCGAG
GCCTGGAAGA CCCTGACCGA CGCCGATAAT CCCAATCCAA AACCGACCCG TTCACTGGCC
TCGAAGCTGT CGATCGGTGT GTCTACGCCG TTCCAGAAAC AGCATCCGGA GATTGCCGAG
TTCTTCAGCA AGGTCGATTT TCCGATTGAT GACCTGAACA AGGCGCTGGC CGAAATGAGC
GAGAAACACA CGGCGCCTCG GGACGCGGCG GTGGCGTTCA TGAAGGCGCA CCCGGATGTG
TGGCAGGCGT GGCTGCCGAA GGATGTGGCG CAGAAGGTTC AGGCAGGTCT GTAG
 
Protein sequence
MNGFRRLLAA GLTTFGLMTV MPAVSAAQTP IHFADLNWES GSLITDVLRI IVEKGYGLPT 
DTLPGTTITL ETALANNDIQ VIGEEWAGRS PVWVKAEAEG KVASLGDTVK GATEGWWVPE
YVIKGDPAKG IKPLAPDLRS VSDLKKYKDV FKDPETPSKG RFLNSPIGWT SEVVNKQKLT
AYGLQDDFVN FRSGSGAALD AEISSSIRRG KPVLFYYWSP TPLLGKFKLI QLEEPPFDAE
AWKTLTDADN PNPKPTRSLA SKLSIGVSTP FQKQHPEIAE FFSKVDFPID DLNKALAEMS
EKHTAPRDAA VAFMKAHPDV WQAWLPKDVA QKVQAGL