| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0235 |
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| Symbol | |
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| ID | 4711091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 270005 |
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| End bp | 270865 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854695 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001001831 |
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| Protein GI | 121997044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00289978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA TGACCACCGC TGCCGCCACC GCGGCGCTGA CCGTGGGCAT GGCCAGCGCG
GCCAACGCCG ACGAGATCCG CATCGGCTGG ACGGCCTGGG CCGACGCCGA GTTCGTGACC
CGCATGGCCG AGGACGTCAT CACCAGCGAG TTCAACACCG ACGTCGAGCT CGTCCAGACC
GACATCGCCC CGCAGTACAC GGGCCTGGCC CAGGGCGACA TCGATCTGAT GCTGATGTCC
TGGCAGCCGA CCACCCACGA GGACTACGTC GAGCAGTTCG GCGACGACAT CGTCGATCTC
GGCGTCCTGT ACGGCGACGC CGCCCTGGGG TGGATCGTGC CGCAGGACCT CTACGACGAG
GGCCTGACCT CCATCGAGGA TCTCAAGGAT CCGGAGTGGC ACGACCGGCT GGACGGCCAG
ATCCAGGGCA TCGACCCGGG CGCCGGCCTC ACCCGCCTCT CCCACGACGT CATTGAGGAC
TACGACCTCG ACTACAACCT GATCGAGGCC TCGGACTCCG CAATGACGGC GGCACTGAAC
CGGGCTGCTC GCCGCGGGGA CGCCATCGTG GTCACCGGCT GGAGCCCGCA CTGGAAGTTC
GGCGCCTGGA ACCTGGCCTA CCTGGAGGAC CCCAAGGGCA GCCTGGGCGG AGCCGAGTCG
ATCCACGCCA TGGCCCGTCA GGGCTTCGAG GGTGACCACC CCGAGGTGGC CAGCTTCGCC
AGCTGCATCG AGATCGACAT CGACCTGCTC AACGAGTACA TGTACCTCGG TCGCGAGGAA
GGCACCGAGG AGGCTGTTGA GCAGTTCCTC GACGCGGAGG CCGACCTGGT CGATCAGTGG
GTGGAGTGCG CCCGCAACTA A
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| Protein sequence | MKRMTTAAAT AALTVGMASA ANADEIRIGW TAWADAEFVT RMAEDVITSE FNTDVELVQT
DIAPQYTGLA QGDIDLMLMS WQPTTHEDYV EQFGDDIVDL GVLYGDAALG WIVPQDLYDE
GLTSIEDLKD PEWHDRLDGQ IQGIDPGAGL TRLSHDVIED YDLDYNLIEA SDSAMTAALN
RAARRGDAIV VTGWSPHWKF GAWNLAYLED PKGSLGGAES IHAMARQGFE GDHPEVASFA
SCIEIDIDLL NEYMYLGREE GTEEAVEQFL DAEADLVDQW VECARN
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