Gene Sros_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1794 
Symbol 
ID8665072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1913590 
End bp1914582 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC-type proline/glycine betaine transport systems periplasmic components-like protein 
Protein accessionYP_003337527 
Protein GI271963331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG GACGCAGGGT CCGCCTGCTC GCCGGTGTCC TGACACTTGG ACTGGCCGCC 
GCGGGCTGCG GTGGCGCCAA GGTGGAGACC GGCACCGGCA CGGCGCGGAC GTCCGCGGGC
GCCGCCGGGT CGTCGACGCC CGCCGCGGGC GGCACCGTGA GGATCGCCAT CAACCCGTGG
GCCGGCTACG AGGCCAGCGC CGCGGTGCTC TCCTACCTGC TGGAGAAGGA GCTCGGCTAC
AAGGTCGAGA AGAAGGAGCT CGCCGAGCAG GTCTCCTGGG AGGGGTTCGA GAGCGGCGAC
GTCGACCTCA TCGTGGAGAA CTGGGGCCAC GACGACCTGA AGAAGACCTT CATCGAGGAG
AAGAAGGTCG CCGTCGAGGC GGGCCCCACC GGGAACAAGG GCGTCATCGG CTGGTACATC
CCCAAGTGGA TGACGGAGAA GTATCCCGGC ATCACCGACT ACAAGAACCT GAACAAGTAC
GCCGCCCTGT TCACGACCTC GGAGTCGGGC GGCAAGGGTC AGCTTCTCTT CGGCGACCCG
TCCTACGTCA GCAACGAAGA GGCGATCATC AAGAACCTGA AGCTGGACTA CAAGGTGGTC
GTGGGCGGCA GCGAGGCGGC GCTGATCGAG TCCGCCACCC AGGCCCAGCG GCAGAGGAAG
CCGCTGCTCT TCTACTTCTG GGACCCGCAC TGGCTGTTCG ACCGGGTCGA GCTGGTCCGC
GTCAACCTGC CACCCCACAC CGACGGCTGT GACGCCGACC CCAAGAAGGT CGCCTGCGAC
TACGCCGAGC TGGATCTCGA CAAGATCGCG AGCAAACGGT TCGCCGACAC CGGCGGCAAG
GCCTACGAGC TGGTCAAGAA CTTCTCCTGG ACCAACGAGG CGCAGAACGC GGTGGCCAAC
GGCATCACCA ACGACGGGCT GAGCCCCGAG GACGCGGCCA GGAAGTGGGT CGAGGCCAAC
CCGGCCGTCT GGGCCCCCTG GATCCCCAAG TAA
 
Protein sequence
MRIGRRVRLL AGVLTLGLAA AGCGGAKVET GTGTARTSAG AAGSSTPAAG GTVRIAINPW 
AGYEASAAVL SYLLEKELGY KVEKKELAEQ VSWEGFESGD VDLIVENWGH DDLKKTFIEE
KKVAVEAGPT GNKGVIGWYI PKWMTEKYPG ITDYKNLNKY AALFTTSESG GKGQLLFGDP
SYVSNEEAII KNLKLDYKVV VGGSEAALIE SATQAQRQRK PLLFYFWDPH WLFDRVELVR
VNLPPHTDGC DADPKKVACD YAELDLDKIA SKRFADTGGK AYELVKNFSW TNEAQNAVAN
GITNDGLSPE DAARKWVEAN PAVWAPWIPK