| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1628 |
|---|
| Symbol | |
|---|
| ID | 5703472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1865799 |
|---|
| End bp | 1866773 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641271136 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_001536511 |
|---|
| Protein GI | 159037258 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.634582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCCA TTGTTAACAG GAGGGCCCGT CTGGCGGGCA TCTCACTGTC CACGGTGGCG
GCACTCGCGC TCACCGCGTG CGGTGGGGCC AAGGTCGAGT CGTCGGATGC CGCCGATTCG
GGCGACTGCG GTACGTTCAC CATCGCGATC AACCCCTGGG TCGGGTACGA GGCGAACGCG
GCCGTCATCG CCCACGTCGC CGAGACCGAA CTCGGCTGCA CGGTCGTCAA GAAGGACCTC
AAGGAGGAGA TCGCCTGGCA GGGCTTCGGC ACCGGTCAGG TGGACGCGAT CGTGGAGAAC
TGGGGCCACG ACGACCTCAA GAAGAAGTAC ATCGAGGACC AGAAGACCGC GGTCGACGCC
GGTTCGACCG GCGTGGAGGG AGTCATCGGC TGGTACGTGC CGCCATGGAT GGCCGAGGAG
TACCCCGACA TCACCGACTG GAACAACCTG AACAAGTACG CGTCCCTGTT CGAAACCACG
GAGTCCGGTG GCAAGGGGCA GCTGCTCGAC GGCGACCCGT CCTTCGTCAC CAACGACGAA
GCCCTGGTCA AGAACCTGGA GCTGGACTAC AAGGTGGTCT ACGCGGGCAG TGAGCCGGCG
TTGATCCAGG CGTTCCGCCA GGCGGAGAAG GAGAAGAAGC CGGTGCTCGG CTACTTCTAC
GACCCGCAGT GGTTCCTCTC CGAGGTCGAA CTGGTGAAGG TGAACCTGCC CGAGTACCAG
GAGGGCTGCG ACGCCGACCC GGAGAAGGTC GCCTGCGACT ACCCGGTGTA CGACCTCGAC
AAGATCGTCA GCAAGTCGTT CGCCGACGCC AACGGGCCGG CGTACCAGCT GGTCAACAAC
TTCACCTGGA CCAACGAGGA CCAGAACCTG GTGGCCCGGT ACATCGCCCA GGACAACATG
TCGCCGGAAG AGGCGGCCAA GAAGTGGGTC GAGGCCAACA AGGACAAGGT CGAGGCCTGG
CTGCCGCAGA GCTGA
|
|---|
| Protein sequence | MRSIVNRRAR LAGISLSTVA ALALTACGGA KVESSDAADS GDCGTFTIAI NPWVGYEANA
AVIAHVAETE LGCTVVKKDL KEEIAWQGFG TGQVDAIVEN WGHDDLKKKY IEDQKTAVDA
GSTGVEGVIG WYVPPWMAEE YPDITDWNNL NKYASLFETT ESGGKGQLLD GDPSFVTNDE
ALVKNLELDY KVVYAGSEPA LIQAFRQAEK EKKPVLGYFY DPQWFLSEVE LVKVNLPEYQ
EGCDADPEKV ACDYPVYDLD KIVSKSFADA NGPAYQLVNN FTWTNEDQNL VARYIAQDNM
SPEEAAKKWV EANKDKVEAW LPQS
|
|---|
| |