| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1643 |
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| Symbol | |
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| ID | 5058102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1872285 |
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| End bp | 1873256 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640473916 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001158486 |
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| Protein GI | 145594189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.010471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCCA TCGTTAACAA GAGGGTCCTG GCGGGCGTCT CGCTGTCCAC GGTGGCGGCT
CTCGCGCTCA CCGCGTGCGG TGGGACCAAG ATCGAGTCGA CGGACCCCGC CGAAGCGGGC
GACTGCGGCA CCTTCACCAT CGCGATCAAC CCCTGGGTGG GGTACGAGGC GAACGCGGCC
GTCATCGCCC ACGTCGCCGA GACCGAACTC GGCTGCAAGG TCGTCAAGAA GGATCTCAAG
GAGGAGATCG CCTGGCAGGG CTTCGGCACC GGTCAGGTGG ACGCGATCGT GGAGAACTGG
GGCCACGACG ACCTCAAGAA GAAGTACATC GAGGATCAGA AGACCGCGGT GAACGCCGGT
TCGACCGGTG TCGAGGGTGT CATCGGCTGG TACGTGCCGC CATGGATGGC CGAGGAGTAC
CCCGACATCA CCGACTGGAA CAACCTGAAC AAGTACGCCT CCCTCTTCGA GACCACGGAG
TCCGGCGGCA AGGGACAGCT GCTCGACGGT GACCCGTCCT TCGTCACCAA CGACGAAGCC
CTGGTCAAGA ACCTGGGGCT GGACTACCAG GTGGTGTACG CGGGCAGCGA GCCGGCCCTG
ATCCAGGCGT TCCGTCAGGC GGAGCAGGAG AAGAAGCCGG TGCTCGGCTA CTTCTACGAC
CCGCAGTGGT TCCTCTCCGA GATCGAACTG GTCAAGGTGA ACCTGCCCGA GTACGAGGAG
GGCTGCGACG CCGACCCGGA GAAGGTCGCC TGCGACTACC CGGTGTACGA CCTTGACAAG
ATCGTGAGTA AGTCGTTCGC CGACGCCAAC GGGCCCGCCT ACCAGCTGGT CGACAACTTC
AACTGGAGCA ACGAGGACCA GAACGTGGTG GCCCGGTACA TCGCCCAGGA CAACATGTCG
CCGGAGGAGG CGGCTGAGAA GTGGGTCGAG GCCAACAAGG ACAAGGTTGA GGCCTGGCTG
CCGCAGAGCT GA
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| Protein sequence | MRSIVNKRVL AGVSLSTVAA LALTACGGTK IESTDPAEAG DCGTFTIAIN PWVGYEANAA
VIAHVAETEL GCKVVKKDLK EEIAWQGFGT GQVDAIVENW GHDDLKKKYI EDQKTAVNAG
STGVEGVIGW YVPPWMAEEY PDITDWNNLN KYASLFETTE SGGKGQLLDG DPSFVTNDEA
LVKNLGLDYQ VVYAGSEPAL IQAFRQAEQE KKPVLGYFYD PQWFLSEIEL VKVNLPEYEE
GCDADPEKVA CDYPVYDLDK IVSKSFADAN GPAYQLVDNF NWSNEDQNVV ARYIAQDNMS
PEEAAEKWVE ANKDKVEAWL PQS
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