Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_00360 |
Symbol | |
ID | 4384748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 32081 |
End bp | 33004 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639322584 |
Product | hypothetical protein |
Protein accession | YP_788185 |
Protein GI | 116053750 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.116277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGC TTCCCACCTG CCTGCTGGCC GCCACCCTGT TCCTGGGCAG CGCCTCGCTA TACGCCGAAG ACCCCGCCTG TGCCCGCGTC AGGCTGGCCG ATCCAGGCTG GAGCGATATC GCGGTGACCA ACGCCACCGC CGCGTTTCTC CTGGAAAGCC TCGGCTACCA GGTGAAGATC GATACCCTGT CGGTGCCGAT CATCTATGGC GGCCTGCGCG ACGGCCAGGT GGACGCCTTC CTCGGCGGCT GGATGCCCGC GCACCAGGAC TATCACGACA AGTTCGTCGC CAGCGGCCAG GTCGAACGCC TCGCTCGCAA CCTCGATGGC ACCCGCTTCA CCCTGGCGGT GCCGCGCTAC GTCTGGGACG CCGGCGTACA CCGCTTCGAA GACCTCGCCG CGCAAGGGCA ACGCTTCAAC CGCAAGCTGT ACGGGATCGG CTCCGGCGCG CCGGCCAATC AGTCGATCCA GAAGATGATC GACGCCAACC AGTTCGGCCT CGGCGACTGG AAGCTGGTGG AGTCCAGCGA GCAGGCGATG CTCGCCGAAC TCGGCCGGGC CGAGAAGCGC CAGCGCTGGC TGGTGTTCCT CGGCTGGACG CCGCACCCGA TGAACATCCG CCATGACCTG CGCTACCTGG AAGGCGGCGA GCAGTACTTC GGCGACCGCG GCCAGGTCTA TACCCTGGCA CGCAAGGGCT ACGCCGCGCA GTGCCCGAAC CCGGCGCGGC TGCTGGCCAA CCTGCGCTTC GACCTGGACA TGGAGAACCG CCTGATGAGC GACGCGCTGG AAGGCACGGC GACTCCGGCC TCGGCGACCC GCGCCTGGCT CAAGGCCAAC CCGCGGGTGC TCGAGGCCTG GCTGCAAGGG GTGACCAGCC GCGACGGCGG CGACGCCCTG GCCGCGGTTC GCGGCCAGCC ATAG
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Protein sequence | MNRLPTCLLA ATLFLGSASL YAEDPACARV RLADPGWSDI AVTNATAAFL LESLGYQVKI DTLSVPIIYG GLRDGQVDAF LGGWMPAHQD YHDKFVASGQ VERLARNLDG TRFTLAVPRY VWDAGVHRFE DLAAQGQRFN RKLYGIGSGA PANQSIQKMI DANQFGLGDW KLVESSEQAM LAELGRAEKR QRWLVFLGWT PHPMNIRHDL RYLEGGEQYF GDRGQVYTLA RKGYAAQCPN PARLLANLRF DLDMENRLMS DALEGTATPA SATRAWLKAN PRVLEAWLQG VTSRDGGDAL AAVRGQP
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