| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3224 |
|---|
| Symbol | |
|---|
| ID | 5705447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3714919 |
|---|
| End bp | 3715890 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641272655 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_001538022 |
|---|
| Protein GI | 159038769 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATAC CAGCCTGGAT CAGGGCAACG TCCCTCGTTG GCTCGGCCGT ACTGGCACTG
ACGGCGTGCA CGGCCGACAT CCAGCCCCGG GTCGCGGCAC CCGGCCCGCC CGCGGCGATC
GAGTGCGGCA CCCTGACCCT GGCGGTCAAC CCGTGGGTCG GGTACGAGGC GAACGTCGCC
GTCATCAGCT ACCTGGCCAA GAACCAGCTC AACTGCACCG TGGTCGAGAA GGACCTCAGC
GAGGAGGAGT CCTGGAAGCT GCTCGCAGCC GGCGAGATCG ACGCGATCCT GGAGAACTGG
GGCCACGACG ACCTGAAAAA GCAGTACATC GACGACGAGC GGGTTGCCGT GGAACACGGT
CTCACCGGTA ACAAGGGCAT CATCGGCTGG TATGTCCCGC CATGGCTGGC CGAGAGATAC
CCGGGCATCA CCGACTGGCG GAAGCTGAAC GACTACACCT TTCTGTTCCG CACTCCCCGC
TCCGGTGGTA GGGGGGAACT GCTCGGCGGC GACCCCACCT ACGTCACCAA CGACAAGGCG
CTGATCCGCA ACCTGAAGCT GAACTACACG GTCACCTTCA CCGGAAGTGA GGACAAGCTG
ATCGAGGCGT TCCGCACGGC GGAGGAGGAG CGTCGGGCCG TCATCGGATA CTTCTACGCC
CCCCAGTGGT TTCTCTCCGA GGTCGATCTG GTGCACATCA GGCTCCCTGA GTACACACCC
GGCTGTGACG CGGATCCGGC GAAGGTGGCC TGTGACTACC AGCCGTATGA TCTCGACAAG
ATTGCCAACC GGGAGTTCGC CGAATCCGGT AGTCCGGCCG CGGATTTGAT CAAGAACTTC
CAGTGGACCA ACGCCGATCA GAACACGGTG GCCCGTTACA TCCGGCAGGA CAAGATGTCC
CGCGACGAGG CGGCCAAGAA GTGGCTGGAC GCGAACCCCG ACGTCTGGCG GTCCTGGCTG
CCTGCCACCT GA
|
|---|
| Protein sequence | MRIPAWIRAT SLVGSAVLAL TACTADIQPR VAAPGPPAAI ECGTLTLAVN PWVGYEANVA
VISYLAKNQL NCTVVEKDLS EEESWKLLAA GEIDAILENW GHDDLKKQYI DDERVAVEHG
LTGNKGIIGW YVPPWLAERY PGITDWRKLN DYTFLFRTPR SGGRGELLGG DPTYVTNDKA
LIRNLKLNYT VTFTGSEDKL IEAFRTAEEE RRAVIGYFYA PQWFLSEVDL VHIRLPEYTP
GCDADPAKVA CDYQPYDLDK IANREFAESG SPAADLIKNF QWTNADQNTV ARYIRQDKMS
RDEAAKKWLD ANPDVWRSWL PAT
|
|---|
| |