| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4889 |
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| Symbol | |
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| ID | 5318051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1399372 |
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| End bp | 1400373 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776674 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001313606 |
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| Protein GI | 150377010 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.64177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC TGCTTGCGTC TACATGTCTC ATGCTTTGCC TCACGGCGGG AGCATCGGCG
TCGAATGCTG CCGAATGTGG GAGCGTCACC ATCGCCAGCA TGAACTGGCA GAGTGCCGAG
GTCCTCTCGA ACCTGGACAA GTTCATTCTC AACGAAGGTT ACGGGTGCAG CGCCGAGATA
ACGATTGGCG ATACCGTGCC GACAATTACC TCCATGGCGG AGAAAGGTCA GCCCGATATA
GCACCCGAAG CCTGGATCGA CCTCCTGCCC GACGTCGTCA AGAAGGGGCA GGACGACGGT
CGTATCGTCA CGGTCGGTTC CCCGTTGCCG GATGGCGGCG TGCAGGGCTG GTGGATTCCG
AAGTATCTTG CCGACGCCCA CCCGGATATC AAAACAATCG GCGACGCTCT GAAGCACCCC
GAGCTCTTCC CCGCCCCCGA GGATTCGAGC AAGGGCGCTC TGCTGAACGG ACCGCAGGGC
TGGGGCGGCA CAGTCGTGAC GACGCAGCTT TTCAACGCGT TCGACGGCGA GAAAGCCGGA
TTCACCCTGA TCGATACCGG CTCTGCCGCC GGCCTGGATG GCGCCATCGC CAAGGCGTAT
GAGCGCAAGG AAGGTCTTTT TACCTATTAC TGGTCCCCGA CTGCCCTCCT CGGCAAATAC
GAGATGGTCA AGCTCGAGCC CGGCGTTCCG CACGACTCGG CCGAGTGGAA GCGCTGCAAC
ACGGTAGCGG ATTGCCCCGA TCCCAAACCG AACGCATGGC CCGTCGACAC GATCGTGACG
CTGGTCGCCA AGCCCTTTTC CGAGCGGGTC GGCCCCGAGG TGATGGATTA TCTGACCAAG
AGGTCCTGGA GCAACGAGAC CGTCAGCAAG TTGATGGCCT GGATGACCGA CAATCAGGCA
AGCGGTGAAG AAGGTGCGAA GCGCTTCCTC GAAGAGAACC AAGACATGTG GTCGAAGTGG
GTCTCGCCCG AGGCCGCGGA GAAGATCAAA GCCGCGCTCT GA
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| Protein sequence | MNKLLASTCL MLCLTAGASA SNAAECGSVT IASMNWQSAE VLSNLDKFIL NEGYGCSAEI
TIGDTVPTIT SMAEKGQPDI APEAWIDLLP DVVKKGQDDG RIVTVGSPLP DGGVQGWWIP
KYLADAHPDI KTIGDALKHP ELFPAPEDSS KGALLNGPQG WGGTVVTTQL FNAFDGEKAG
FTLIDTGSAA GLDGAIAKAY ERKEGLFTYY WSPTALLGKY EMVKLEPGVP HDSAEWKRCN
TVADCPDPKP NAWPVDTIVT LVAKPFSERV GPEVMDYLTK RSWSNETVSK LMAWMTDNQA
SGEEGAKRFL EENQDMWSKW VSPEAAEKIK AAL
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