| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3427 |
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| Symbol | |
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| ID | 4625618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4235784 |
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| End bp | 4236716 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639798544 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_944710 |
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| Protein GI | 119947030 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00319099 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTT TAAAAAAACT AGCTACTGCC GCTGCAGTTA GCTCACTAGT ACTTGGCGCT
ACTGTAGCCC AAGCAGAAGA CTCGAAAGAA CCTATTGTTA TTCCTACCCA TAACTGGACG
AGCCAAATCA CCATGGCATA CGTTATCGGT GGAATTTTCG AAAGCATTGG CGACAATGTT
TCTTATGTAC CCGCTGATAG CCAGGCGGTT TACGAATCGA TTCGTAACGG TGACGTCACT
ATTGCTCACG AAATATGGCA GTCTACTTTT GGTAAGTCCT TCAACAACGC CTTAGACGCT
GGCGGCATCA TTGATGTAGG CAAGCACGCT GCTGTTTCTC AGGAAGAGTG GTGGTATCCT
GCCTATGTTG GCGAGCTATG CCCTGGCCTA CCTTCCTGGA AAGCACTAAA CGATTGCTCC
GAGTTGTTTG CAACAGCCGG CAGTGGTGGC AAGGGGCGCT ATCTCGATGG GCCTATGGAC
TGGCATGGCC AAGAAACCCT AGACCGCATC GAAGCACTTG ACATGAATTT TACCGCTAAG
TTTGCCGGGT CATCTGGTGC ACTTTGGGCA GAACTGGAGT CGGCAGCTAA AGACAACCGT
GCGGTTGTGG TCTTTAACTG GTCACCTAAC TTCACCGATG CCGGTGACGG TGGCAGCTTC
GTTGAATTCC CCGCGTATAG CGATGGCTGT AAGGTTTCAG CTGGTGGTGA TGGCAAATGT
GGCTCTCCAG CGGCGGGTTG GTTGAAGAAG GCCGCTTATT ATCAAATGCC TGCAAAATGG
CCAGCAGCTT ACAAAATCTT TAACCAAATC TCCTTTACTA AAGGTGATAT CGGCAACATG
GCTGCATTGG TTGACATCGA TGGTATGAGC CACGAAGAAG CCGCTACTAA ATGGCTGGCT
GACAACGAAG CAAAATGGAA AAGCTGGCTC TAA
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| Protein sequence | MKFLKKLATA AAVSSLVLGA TVAQAEDSKE PIVIPTHNWT SQITMAYVIG GIFESIGDNV
SYVPADSQAV YESIRNGDVT IAHEIWQSTF GKSFNNALDA GGIIDVGKHA AVSQEEWWYP
AYVGELCPGL PSWKALNDCS ELFATAGSGG KGRYLDGPMD WHGQETLDRI EALDMNFTAK
FAGSSGALWA ELESAAKDNR AVVVFNWSPN FTDAGDGGSF VEFPAYSDGC KVSAGGDGKC
GSPAAGWLKK AAYYQMPAKW PAAYKIFNQI SFTKGDIGNM AALVDIDGMS HEEAATKWLA
DNEAKWKSWL
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